Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq15 170 4e-37 seq21 136 7e-27 >seq15 Length=659801 Score = 170 bits (188), Expect = 4e-37 Identities = 562/859 (65%), Gaps = 25/859 (3%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || | ||| | ||||||||||| || ||||| |||| | |||||| ||||| Sbjct 501602 TGGTACTCGCTCACCTTCTTCTCAAAGAAATTCGTCTTGCCCTGAAGCGAGATCATCTCC 501661 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCAG 47958 |||||| ||||| | | ||| || | | || ||| || || |||| Sbjct 501662 ATGAAGTCAAAGGGCTGCGACACGTTGTAGTGCT-TCTCCTCGCCAAGTGACACAAGCAG 501720 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||| || |||||||||| || ||| || ||||||||| ||||| Sbjct 501721 TCGGTCCGCAACAAACTCGATGTAACGTGCCATCAGCTCCGCGTTCATGCCAATGAGTCT 501780 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 || || | || | || |||||| ||| || | ||| || ||| | | |||| Sbjct 501781 TACTGGAAGCGCGTCGCAGATAAACTCGCGCTCGATGTCCACCGCGTCCACGATGATCTC 501840 Query 48079 CTTAACGCGGGACTCT---GAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || | ||||| | |||| | || |||| ||||| Sbjct 501841 CAGTACGCG---CTCGCGCGACAGCTTGTTCTTGATGTGCGAGTTGTACAGCAGACAGGC 501897 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 ||| || |||||| ||| ||||| || ||||||| | ||| ||| || || || Sbjct 501898 AAAATCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCATTGCTGAACGTCAGCCCCGG 501957 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | || | || || | |||||| | || ||| || || |||||||| ||||| Sbjct 501958 CATCAGGCCGCGCTTCTTCATCCAGAACAGCGCACAGAAGGACCCGGAGAAGAATATGCC 502017 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGC--GTTCTTGTCTGAGATC 48313 |||||| || || || || | || | ||| | | ||||| || | || | ||| Sbjct 502018 CTCCACCGCGGCAAAGCCGATCAGTCGCTC-CTG---GAAGCTTGTACCGCTCCCA-ATC 502072 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || | |||||||||||||||||||| ||||||||| | |||| || || | | Sbjct 502073 CACCGCATCGCCCAGTCTGCCTTCTTCTGGATGCATGGGACGGTCTGGATCGCGTGCAGC 502132 Query 48374 AGCTTCTTGCAC--TCACCT-GC-GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 || | ||| || ||| || ||||| | ||| || |||||| | ||| | Sbjct 502133 AG----TCGCAGCTTCTCCTCGCTGTCCGTGATATACGTGTCCAGCAGCACAGAATACGT 502188 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| | ||||| || | |||||||||||||||||||| ||||| || Sbjct 502189 CTCCGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAAGGCCCGCGCCTCCGGTAC 502248 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 || ||| || | ||| | || | ||||||||| |||| || ||||| | || Sbjct 502249 CTTCACATCGTTCATGAACCGCTGCGCCAGATTCTCCATGACGATGCCATCGCTGCCGGC 502308 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCC 48609 ||||| ||||| || ||||| | ||| || |||| | | |||| | |||| | Sbjct 502309 GAAGAATGCAAGCACGTGTTTGATGAAGTGCTGCTCATCCGCGCTGAGCGTCACCCAGTC 502368 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCGAGTGCTTTTT 48668 || | ||| ||||||| ||| | || ||||| ||||||| | | | | ||| | | Sbjct 502369 CTTCATGTCGTTGCCCAAGTCGATCTCCTCCACCGTCCAGATGCAGCTCTCCTGC-TCCT 502427 Query 48669 TGTACATGCCCCATATGTC 48687 ||||| ||| |||||| || Sbjct 502428 TGTACTTGCGCCATATATC 502446 >seq21 Length=1031504 Score = 136 bits (150), Expect = 7e-27 Identities = 952/1507 (63%), Gaps = 71/1507 (5%) Strand=Plus/Minus Query 212694 AGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATA 212753 ||||||| ||| ||| |||||| ||| | || | | ||| |||||||| || | Sbjct 214566 AGGTTCATGGATTGAGACTGGTCAATGTACTGGCCACGGTCCCGTGCCATGTCGATCAGC 214507 Query 212754 TCTCTCTGGGAGAGCTCCCACACGGTCTTGA-AGATTTCTTTGAGGTCCTCTGGGAAGCC 212812 | ||||| | |||||| || || | || | | |||| ||||| ||||| | Sbjct 214506 CAACGCTGGGGAATCTCCCATACAGT-TCGATAAAGATCTTGCAGGTCGCTTGGGATCGC 214448 Query 212813 GGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTT 212869 |||||| ||||||||| ||| ||| || | | ||||| || ||| | Sbjct 214447 TTCAATGTTCATCACAGACCCGTTGTACGAAATGATCTCGTTC---CGCATCTCTTCGGT 214391 Query 212870 CCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACC 212929 ||||||||| | || ||| | | ||||||| ||| || | | || || || Sbjct 214390 CCAGAGGCCACGGGCGATGAGGTCCATCACCAGGTACTTGTTCACCACAGGAAACTCCCC 214331 Query 212930 TGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCC 212989 ||||| | | |||| || || || ||||||| | || ||||||||| || Sbjct 214330 GCTCAGCACACGACGAACATAAATATTCGAGGTAAAGGGCTCAAAGCACTCGTTGTTGCC 214271 Query 212990 CAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCC 213049 |||||||| | ||| || ||||||||||| || || ||||| ||| | || || Sbjct 214270 GAGAATCTGCGAGGTGGATGCGGTGGGCATGGGGGCGACTAGGAGGGAGTTGCGCATGCC 214211 Query 213050 GTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAG-GTCCTCGT 213108 | || | | | || | ||||||||||||| ||| | | ||||| Sbjct 214210 GGTCTGTACCACCCTCTGTTTGAGTGCGGCCCAGTCCCATCGACCACTGTGCGGCCTCGG 214151 Query 213109 CCTTCACGTTCCACATGTCAAACTGCA----AGATGCCTTTGCTCACGGGGCTGCCCTGG 213164 ||| ||||||||||||||||||| || ||| || ||| | || | Sbjct 214150 G-TTC---TTCCACATGTCAAACTGCAGCGTAGCTGCAGCGGC---CGGAGAC-CCTTCA 214099 Query 213165 TAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAG 213224 || | ||| || || | |||| | |||||||| ||||||| || || ||| || Sbjct 214098 AAACTGTCGTACGGCCCCTCCTCCGTTGCCAGCTCCATCGACGCCTCCACAGCGGCGAAG 214039 Query 213225 TAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATC 213284 || | || || || |||||| ||| |||| | ||| | ||| ||||||||| | Sbjct 214038 TACAAAGTCTCGAAGATCTCCGCGTTCAGCTGCCGCGCCCCCTCCGACATGAAGGGCAGC 213979 Query 213285 ATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTC 213344 |||| | ||| || || || || || || || ||| ||||||| | ||| || Sbjct 213978 CGCATGAGAATGAAGGTGTCCGCTAGGCCTTGCACACCAATGGCGATGGGGCGGTGCTTC 213919 Query 213345 AGGTTAGACTTGGAGCACTCC---TCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTG 213401 ||||| | ||| | || |||| ||||||| |||||| ||| || | || Sbjct 213918 AGGTTGCTCA---AGCGCGCCGTTTCCACGGGGTAATAGTTGCGGTCAATCACGCGATTT 213862 Query 213402 AGGTTGCGGGTG----GCC--ACTTTGGTG-ACATGGGCCAGGTACTCGTGATTGAACAC 213454 | |||||| ||| ||| || |||| |||| ||| | |||||||||| | Sbjct 213861 AAGTTGCGTGTGATCTGCCTCACCACGGTGTACAT----CAGTTG---GTGATTGAACTC 213809 Query 213455 GTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCAC 213514 | | | | | || || |||| || | || |||||||| || || Sbjct 213808 GCGCTTCTCAACGTCGACGAAGCGCGGCAAAGCAACCGACGCGAGGTTGCACACCGCTGT 213749 Query 213515 CTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCC 213574 |||| | | |||||||| | ||||||||||||||||| ||| |||||| || Sbjct 213748 CTCCCCCGGGCTAGTGTACTCGACAATCTCGGTGCACAGGTTCGAGCACTTGATGGTCCC 213689 Query 213575 CAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCC 213634 |||||| ||||| || || |||| |||||| |||| ||||| ||| || Sbjct 213688 AAGGTTCCTCTGGTTAGATTTCTCGTTACATTGGTCCTTGAAGAGAATGTAAGGGCCGCC 213629 Query 213635 GGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGACCACCCGC 213692 ||||| | | ||| ||||||| ||| ||| | | |||| | | | | Sbjct 213628 CGTCTCGATTAGCGACTCCAGTAT--GGCAAACCACAAAT-CCTGCGCGGGTATAGTCCT 213572 Query 213693 CTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG 213752 || || | | || ||||||||| | ||| ||||| || ||| | ||| || Sbjct 213571 CTTACCACGACCCTCG--GCCTCGTACCTCTGGTAAAGCTCATTAAATGCCGCGCCGTAG 213514 Query 213753 A---CCCTGTCCAGTCCCGGACAGGA-TGCGGGACACATGAGGCTCCAGTCCCCGTCATC 213808 | ||| || ||||| ||| || ||| | |||||| |||| ||| || | Sbjct 213513 CAATCGCTG---AGACCCGGGCAGTTGTGGGGGTC-CATGAGCGTCCACATCCCCTCG-C 213459 Query 213809 TCTGACTCTCTG-CATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCC 213867 ||| | || ||||||||| || |||||||| ||| || ||| ||||| | || | Sbjct 213458 TCTTCACCCGTGTCATGAACAGATCTGGGACCCAAAGCCCGTAGAAGAGGTCGCGGGCAC 213399 Query 213868 TCCTCTCGTCCACTCCAGAGTTTTTGCGC---AGATCTAGAAAGTCAAAGATGTCCGCGT 213924 | || ||| || | ||| |||| || || ||| |||| ||||| |||| Sbjct 213398 GCTGATCATCCTTGCCCGTGTT---GCGCTTCAGCAACAGGAAGCCAAAAATGTCGGCGT 213342 Query 213925 GCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCA 213981 |||||||||| | ||||||||| ||||||||| | ||| ||| ||||||||||| Sbjct 213341 GCCACGGCTCAAGGTAGATGGCGAAGGCGCCCTTGCGCTTACCGCCACCCTGGTCCACGT 213282 Query 213982 GCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGG 214041 | || ||||||||| |||| | || || |||||||| ||| ||||| | Sbjct 213281 AGCGCGCGGTGTTGTTGAAGACCCGCAACATCGGCACGAGCCCGTTCGACGTACCGTTCG 213222 Query 214042 TTCCCGCTATATACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACC 214099 | || || || || ||| || | | || ||| |||| || || |||||||| Sbjct 213221 TGCCGGCAATGTAGCTGCCCTCCGCGCGGATGTTGTGCACATG--CAGGCCAATGCCACC 213164 Query 214100 GGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTC 214159 ||| ||| ||||| ||| || | | | || || || || | |||||||| Sbjct 213163 GGCTGCTTTGCTGATCAGGGCACACTCCTTGAGCGTGTCGTAAATACCCTCGATGCTGTC 213104 Query 214160 ATCTGTG 214166 |||| || Sbjct 213103 ATCTTTG 213097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931509989090560