Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq21 302 6e-77 seq19 201 1e-46 seq36 158 2e-33 seq25 140 4e-28 >seq21 Length=1031504 Score = 302 bits (334), Expect = 6e-77 Identities = 1017/1573 (65%), Gaps = 14/1573 (1%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 |||||||| || || | || || || ||||| || || ||||||||||| || || || Sbjct 937682 GCTATTGGCATTGACCTGGGCACGACATACTCGTGCGTGGGTGTATGGCAGAACGAGCGC 937623 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || ||| |||| ||||| || ||||| ||||| || ||||||||||| || || Sbjct 937622 GTGGAAATCATCGCGAACGACCAGGGCAACCGCACAACGCCGTCGTACGTTGCGTTCACG 937563 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || || || | || ||||| || || || ||| || |||||||| ||| Sbjct 937562 GACTCGGAGCGCCTGATCGGCGATGCGGCGAAGAACCAGGTGGCGATGAACCCGCACAAC 937503 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || ||||||||||| | ||||| |||||||| || || || | Sbjct 937502 ACGGTGTTCGACGCGAAGCGCTTGATTGGCCGCAAGTTCAACGACTCTGTTGTGCAGGCG 937443 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCG--GTGTGGCTGATAAGCCTATGATTA 195596 || || ||| ||||| | | | ||| || || | | | | | ||||| ||||| Sbjct 937442 GACATGAAGCACTGGCCCT-TCAAGGTGACGACGAAGGGCGACAGC-AAGCCCGTGATTT 937385 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656 ||| | | | ||||||| |||| || | || || || || || |||||| Sbjct 937384 CTGTGCAGTACCGCGGTGAGGAGAAGATCTTCACGCCGGAGGAGATCAGCTCGATGGTGC 937325 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 || | |||||||||||||| || || | | | |||| || ||||| | || || | Sbjct 937324 TGCTCAAGATGAAGGAGACGGCTGAGGCATACCTGGGCAAGCAAGTGAATAAGGCCGTGG 937265 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 |||| || || || ||||||| || || || || |||||||| ||||| || | | | | Sbjct 937264 TGACGGTGCCGGCGTACTTCAACGACTCGCAGCGTCAGGCGACGAAGGATGCCGGTACGA 937205 Query 195777 TTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 |||| ||||| | ||| || | || ||||| || || || ||||| || || || || Sbjct 937204 TTGCTGGTCTGGA-TGTGCTGCGCATCATCAACGAGCCGACGGCGGCGGCCATCGCGTAC 937146 Query 195836 GGTCTGGACAAGAACAAGGACG---AAGATAAAAATGTATTGATCTTTGATCTCGGTGGT 195892 || ||||||||| | | |||| | || || || ||||||| || || ||||| Sbjct 937145 GGCCTGGACAAGGGCGACGACGGCAAGGAGCGCAACGTTCTGATCTTCGACCTTGGTGGC 937086 Query 195893 GGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACT 195952 || ||||| ||||| | || || | || || || || || ||||| || ||||| || Sbjct 937085 GGCACGTTCGATGTGACGCTGCTGACGATCGACGGCGGCATCTTCGAGGTGAAGGCGACG 937026 Query 195953 GCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTC-CGTCATTTGTC 196011 || || || || || || || || || ||||| || || || ||| || | Sbjct 937025 AACGGCGACACGCACCTTGGCGGCGAGGACTTCGACAACCGCCTGGTCACGTTCTTCAGC 936966 Query 196012 TGATGAGTTCCGTCGAAAGAATAAG---AAAGATATTTCTGGAAATCCTAGGGCTCTTCG 196068 || |||||| || ||||| ||| || || | || | | | || || || Sbjct 936965 -GAGGAGTTCAAGCGCAAGAACAAGGGCAAGGACCTGTCGTCGAGCCAGCGCGCGCTGCG 936907 Query 196069 TCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAAT 196128 || || | || || || || || || || || || || || || || | || | | Sbjct 936906 CCGTCTGCGCACGGCGTGCGAGCGCGCGAAGCGCACGCTGTCGTCCGCGACGCAGGCGAC 936847 Query 196129 GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACG 196188 | | ||||||||| || ||||||| | ||||||||| | | || || || || || || Sbjct 936846 GATCGAGATTGATGCGCTGTTTGAAAGCATTGACTTCCAGGCCACCATCACGCGCGCGCG 936787 Query 196189 TTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACT 196248 || || ||| | | ||| | || | | || | || || || | || || Sbjct 936786 CTTCGAGGAGCTGTGCGGTGACCTCTTCCGCAGCACGATCCAGCCAGTGGAGCGTGTGCT 936727 Query 196249 TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAAC 196308 | ||||| |||||||| ||| || | || | || | ||||| || || || Sbjct 936726 GCAGGACGCCAAGATGGACAAGCGCTCCGTGCACGACGTGGTGTTGGTGGGCGGGTCTAC 936667 Query 196309 CCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAA 196368 ||||| || ||| | || | | || ||||||| | || || | ||||| Sbjct 936666 GCGTATCCCAAAGGTGCAGAGCCTCGTGTCGGACTTCTTCGGTGGCAAGGAGCTGAACAA 936607 Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428 | |||||||| || || || || || || || || || || ||||| || || | Sbjct 936606 GAGCATCAACCCCGACGAGGCTGTCGCGTACGGCGCCGCGGTGCAGGCGTTCATCCTGAC 936547 Query 196429 AGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCT 196488 || | | | || | | | ||| ||||| || ||||| |||| | | || Sbjct 936546 GGGCGGCAAGAGCAAGCAGACAGAGGGTCTGCTGCTGCTCGATGTGACACCGCTGACGCT 936487 Query 196489 GGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCC 196548 ||| |||| || || ||||| || ||||| | || | | ||||| || || || Sbjct 936486 GGGCATTGAGACGGCTGGTGGCGTCATGACGGCCCTGATCAAGCGCAACACGACGATCCC 936427 Query 196549 GACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCA 196608 ||| |||||| || |||| || ||||| | || || || || || || || || || Sbjct 936426 GACCAAGAAGAGCCAGATCTTCTCGACGTACGCGGACAACCAGCCGGGCGTGCACATCCA 936367 Query 196609 AGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTT 196668 || | || || || ||| | | ||||| ||| || || || || ||||| || Sbjct 936366 GGTGTTCGAGGGCGAGCGCGCGATGACGAAGGACTGCCACCTGCTGGGCACATTCGACTT 936307 Query 196669 GACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGA 196728 | | || ||||| | || || | || || |||||||| | || ||||| | || Sbjct 936306 GTCCGGTATTCCGCCCGCGCCGCGGGGCGTGCCACAGATCGAGGTGACGTTCGACCTGGA 936247 Query 196729 CGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGAT 196788 ||| || || || || ||||| | || ||||| |||| | ||||| |||| Sbjct 936246 CGCGAACGGCATCCTGAACGTGTCGGCCGAGGAGAAGGGCACCGGCAAGCGCAGCCAGAT 936187 Query 196789 TGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGA 196848 || ||||| |||||||| || || ||||| || || || |||||||| | || Sbjct 936186 CACCATCACCAACGACAAGGGCCGCCTGAGCAAGGATGAGATCGAGCGTATGGTGAACGA 936127 Query 196849 TGCGGAAAAGTAC 196861 || | |||||| Sbjct 936126 CGCAGCCAAGTAC 936114 Score = 136 bits (150), Expect = 5e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 |||||||| || || | || || || ||||| || || ||||||||||| || || || Sbjct 938788 GCTATTGGCATTGACCTGGGCACGACATACTCGTGCGTGGGTGTATGGCAGAACGAGCGC 938729 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || ||| |||| ||||| || ||||| ||||| || ||||||||||| || || Sbjct 938728 GTGGAAATCATCGCGAACGACCAGGGCAACCGCACAACGCCGTCGTACGTTGCGTTCACG 938669 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || || || | || ||||| || || || ||| || |||||||| ||| Sbjct 938668 GACTCGGAGCGCCTGATCGGCGATGCGGCGAAGAACCAGGTGGCGATGAACCCGCACAAC 938609 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTT 195516 || || || ||||||||||| | ||||| |||||||| Sbjct 938608 ACGGTGTTCGACGCGAAGCGCTTGATTGGCCGCAAGTT 938571 Score = 134 bits (148), Expect = 2e-26 Identities = 233/339 (69%), Gaps = 6/339 (2%) Strand=Plus/Plus Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 |||||||| || ||||| |||| | ||| | || ||||| | | ||||| | Sbjct 335459 ATGGTGTTACAGAAAATGAAAGAGATCTCTGAAACGTTTTTGGGTGAGAAGGTGAAGAAC 335518 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || ||||| || || || ||||||| ||| | || || ||||||||||||||| | Sbjct 335519 GCGGTCGTGACGGTGCCAGCCTACTTCAACGATGCGCAGCGCCAGGCGACAAAGGACTCC 335578 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | || ||||| || ||| | | | || ||||| || || ||||||||||| ||| Sbjct 335579 GGCAAGATCGCGGGCCTTAACGTTGTCCGTATCATCAACGAGCCGACAGCGGCTGCCATT 335638 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||| ||||||| || || || ||| | || | ||||| |||||| Sbjct 335639 GCGTACGGTCT------CAACAAGGCCGGGGAGAAGAATATTCTGGTATTTGACCTCGGT 335692 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 ||||| ||||| ||||| || ||||| | || || | || | ||||| || || Sbjct 335693 GGTGGCACGTTCGATGTGTCCCTTCTTACGATCGATGAGGGCTTCTTCGAGGTGGTCGCG 335752 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || ||||| || || || || ||||| || || ||| Sbjct 335753 ACGAACGGTGACACCCACCTCGGCGGTGAGGACTTTGAT 335791 Score = 127 bits (140), Expect = 3e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 |||||||| || || | || || || ||||| || || ||||||||||| || || || Sbjct 934209 GCTATTGGCATTGACCTGGGCACGACATACTCGTGCGTGGGTGTATGGCAGAACGAGCGC 934150 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || ||| |||| ||||| || ||||| ||||| || ||||||||||| || || Sbjct 934149 GTGGAAATCATCGCGAACGACCAGGGCAACCGCACAACGCCGTCGTACGTTGCGTTCACG 934090 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || || || | || ||||| || || || ||| | |||||||| ||| Sbjct 934089 GACTCGGAGCGCCTGATCGGCGATGCGGCGAAGAACCAGGTGGGGATGAACCCGCACAAC 934030 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTT 195516 | || || ||||||||||| | ||||| |||||||| Sbjct 934029 CCAGTGTTCGACGCGAAGCGCTTGATTGGCCGCAAGTT 933992 >seq19 Length=1043608 Score = 201 bits (222), Expect = 1e-46 Identities = 467/697 (67%), Gaps = 14/697 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || |||||| | || || || ||||| || |||||||| | | || |||| Sbjct 410970 GCCATCGGCATCGATCTGGGCACGACCTACTCGTGCGTTGGTGTCTTCAAGAACGATCAG 411029 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||||| | || || || || ||||| || || || || || || ||||| || Sbjct 411030 GTGGATATTATTGCCAACGATCAGGGTAACCGCACGACGCCGTCCTATGTGGCCTTCACT 411089 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || |||| ||||| || || || ||| || |||||||| ||| Sbjct 411090 GAGACGGAGCGCCTGATTGGCGATGCGGCGAAGAACCAGGTGGCCATGAACCCGCACAAC 411149 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || ||||| |||||||| | ||||||||||||| || | | || | Sbjct 411150 ACCGTGTTTGATGCGAAGCGCATGATTGGTCGCAAGTACGACGACCCCGACCTGCAGTCC 411209 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGCCTATGATTA 195596 || || || ||||| | | | |||| | | |||| || ||||| | || Sbjct 411210 GACATGAAACACTGGCCCTTTAAAGT-GACCGTCCGGAACGGG----AAGCCGGTCATCG 411264 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTATGGTG 195655 | || | | || || ||| | || | ||| ||||| || || ||||| | |||||| Sbjct 411265 AGGTGCAGTACCAAGGCGAGG-GCAAGATTTTTCTCCCAGAGGAGATTTCTGCGATGGTG 411323 Query 195656 TTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTT 195715 | ||||||||||| || ||||| || | | | || | |||||||| ||||| || Sbjct 411324 CTTCAGAAGATGAAGGAAACAGCGGAGTCCTACCTCGGCACCACTGTGAAGGATGCCGTC 411383 Query 195716 GTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCT 195775 | ||||| || || || || | ||| || || || ||||| ||||| ||||| | | Sbjct 411384 ATCACTGTTCCCGCATATTTTAATGACTCGCAGCGCCAGGCAACAAAAGACGCCGGCACC 411443 Query 195776 ATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 ||||| ||||| ||| | | | || || || || || || || ||||| || || || Sbjct 411444 ATTGCTGGTCTCAACGTTATGCGTATCATTAACGAGCCGACGGCCGCTGCCATCGCGTAC 411503 Query 195836 GGTCTGGACAAGAACAAGGACGAA----GATAAAAATGTATTGATCTTTGATCTCGGTGG 195891 || ||||| | | | || ||| || || ||||| | ||||| || || || || Sbjct 411504 GGCATGGAC-CGCAAAGGGGAGAAGGGGGAAAAGAATGTGCTTATCTTCGACCTTGGCGG 411562 Query 195892 TGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTAC 195951 || ||||| ||||| | || || | || ||| || ||||||| || ||||| || Sbjct 411563 CGGCACGTTCGATGTGACGCTGCTGACGATCGAATCCGGCGTATTCGAGGTGAAGGCGAC 411622 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || ||||| ||||| || ||||| || || || ||| Sbjct 411623 GGCGGGTGACACTCACCTCGGTGGCGAGGACTTTGAT 411659 >seq36 Length=555156 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || || || || || || || | ||||||||||||||| Sbjct 340789 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGACGATTGCGCTCGAGGTTGAGTCGAGC 340730 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || |||| |||||||| || || ||||| ||||| || || || ||| Sbjct 340729 GATACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 340670 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || ||||| || |||||| Sbjct 340669 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 340610 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| |||||||| || || ||||| || || | || || ||||| Sbjct 340609 ATTCAGAAGGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGTGG 340563 >seq25 Length=1382006 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| || || || || || || || | ||||| || |||||| Sbjct 844249 ATGCAGATCTTTGTGAAGACGCTGACCGGCAAGACGATTGCGCTCGAAGTCGAGTCGAGC 844190 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || |||| ||||||||||| || ||||| ||||| || || || ||| Sbjct 844189 GATACGATCGAGAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 844130 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || || || || || || |||||| Sbjct 844129 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGTCGCACGCTGGCGGACTACAAC 844070 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || | ||||| || || | || || ||||| Sbjct 844069 ATCCAGAAGGAGTCCACGTTGCACCTGGTGCTGCGCCTGCGCGGTGG 844023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657846290594480