Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq15 159 4e-33 seq21 150 2e-30 seq20 118 1e-20 seq25 87.8 2e-11 >seq15 Length=659801 Score = 159 bits (176), Expect = 4e-33 Identities = 214/298 (72%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || | |||||| ||||| ||||||| | |||| | || | Sbjct 502191 CCGAGTGGATGTTCTCCATCATCAGCTGGAACCCGTAGAAGGCCCGCGCCTCCGGTACCT 502250 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 || || ||||||||||| ||||| ||||| |||||||| |||||| |||||| Sbjct 502251 TCACATCGTTCATGAACCGCTGCGCCAGATTCTCCATGACGATGCCATCGCTGCCGGCGA 502310 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||| ||||| ||||| |||| || ||||||||| |||||||| Sbjct 502311 AGAATGCAAGCACGTGTTTGATGAAGTGCTGCTCATCCGCGCTGAGCGTCACCCAGTCCT 502370 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 ||||| || | ||| | |||||| | |||||||| || ||| || |||| Sbjct 502371 TCATGTCGTTGCCCAAGTCGATCTCCTCCACCGTCCAGATGCAGCTCTCCTGCTCCTTGT 502430 Query 869871 ACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 || | ||||| | ||||| ||| ||||||||||| ||||| ||||| || Sbjct 502431 ACTTGCGCCATATATCATGGTACTTGATGGGGAAGAGGACGTAGCGGAAAGGGTTCTC 502488 Score = 138 bits (152), Expect = 1e-26 Identities = 225/318 (71%), Gaps = 7/318 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| |||||||| ||| | ||| || || || |||||||||| ||||||||| Sbjct 501596 GCCTTTTGGTACTCGCTCACCTTCTTCTCAAAGAAATTCGTCTTGCCCTGAAGCGAGATC 501655 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 | |||||| | | || ||| || | | ||||||||||| || || || ||| | Sbjct 501656 ATCTCCATGAA-GTCAAAGGGCTGCGACACGTTGTAGTGCTTCTCCTCGCCAAGTGACAC 501714 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||||| ||||| || |||||||||||||| | ||| || | ||||||||||| || Sbjct 501715 AAGCAGTCGGTCCGCAACAAACTCGATGTAACGTGCCATCAGCTCCGCGTTCATGCCAAT 501774 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 ||| || || |||| |||| | |||||| |||||| || || || || ||||| Sbjct 501775 GAGTCTTACTGGAAGCGCGTCGCAGATAAACTCGCGCTCGATGTCCACCGCGTCCACGAT 501834 Query 868930 GATCTGCCTGGGCACG-TCGGCCGAGGGCTTG---TTGACGAGCATCGTGTAGAGCAGGC 868985 ||||| || | | || ||| ||| ||||| |||| | || |||| ||||| | Sbjct 501835 GATCT-CCAGTACGCGCTCGCGCGACAGCTTGTTCTTGATGTGCGAGTTGTACAGCAGAC 501893 Query 868986 AGGCAAAGTCGCAGTGCA 869003 ||||||| ||| ||||| Sbjct 501894 AGGCAAAATCGGTGTGCA 501911 Score = 100 bits (110), Expect = 3e-15 Identities = 194/285 (68%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | || ||||| || | || || ||||| |||||||||||| Sbjct 501914 CCCTCGTCGCGCGAGATGAGCTCATTGCTGAACGTCAGCCCCGGCATCAGGCCGCGCTTC 501973 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | ||| || | || ||||| || ||||| || |||||||| || ||||||||| Sbjct 501974 TTCATCCAGAACAGCGCACAGAAGGACCCGGAGAAGAATATGCCCTCCACCGCGGCAAAG 502033 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||||| || ||||| ||| | | | |||| |||||| |||||||||| Sbjct 502034 CCGATCAGTCGCTCCTGGAAG--CTTGTACCGCTCC----CAATCCACCGCATCGCCCAG 502087 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 || ||||| ||| | | || || || | ||| ||| | | || | ||| || Sbjct 502088 TCTGCCTTCTTCTGGATGCATGGGACGGTCTGGATCGCGTGCAGCAGTCGCAGCTTCTCC 502147 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | |||| ||| ||| ||||| | ||| | ||||| |||||| Sbjct 502148 TCGCTGTCCGTGATATACGTGTCCAGCAGCACAGAATACGTCTCC 502192 >seq21 Length=1031504 Score = 150 bits (166), Expect = 2e-30 Identities = 194/265 (73%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||||||||| |||| ||| ||||| || | ||| |||||||| ||||| || Sbjct 213292 CTGGTCCACGTAGCGCGCGGTGTTGTTGAAGACCCGCAACATCGGCACGAGCCCGTTCGA 213233 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| ||||| || | |||| ||| | ||||| | |||||| | | ||| Sbjct 213232 CGTACCGTTCGTGCCGGCAATGTAGCTGCCCTCCGCGCGGATGTTGTGCACATGCAGGCC 213173 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||||| ||||| | ||| ||| || || |||| |||||||||||||| || ||||| Sbjct 213172 AATGCCACCGGCTGCTTTGCTGATCAGGGCACACTCCTTGAGCGTGTCGTAAATACCCTC 213113 Query 1630245 GATCGAGTCGGCCTT-CATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 ||| ||| | || ||| | || |||||||| || ||||||| | | ||| | Sbjct 213112 GATGCTGTCATCTTTGGATG-CAACCAGAAAGCATGAGCTCATTTGCGGCTTTGGCGTAC 213054 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGC 1630328 |||| |||||||| || || ||||| Sbjct 213053 CGGCATTGAAGAGAGTCGGAGTCGC 213029 Score = 95.1 bits (104), Expect = 1e-13 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1628466 CCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAG 1628525 ||| || |||| ||||||||||| || || | || |||||||| ||| || || Sbjct 213427 CCAAAGCCCGTAGAAGAGGTCGCGGGCACGCTGATCATCCTTGCCCGTGTTGCGCTTCAG 213368 Query 1628526 GTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 1628585 || || | | ||||||||||||||||||||| |||||| ||| ||||||||||| Sbjct 213367 CAACAGGAAGCCAAAAATGTCGGCGTGCCACGGCTCAAGGTAGATGGCGAAGGCGCCCTT 213308 Query 1628586 GCGCTTGCCGCCGCC 1628600 |||||| ||||| || Sbjct 213307 GCGCTTACCGCCACC 213293 >seq20 Length=978369 Score = 118 bits (130), Expect = 1e-20 Identities = 225/320 (70%), Gaps = 11/320 (3%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| |||||| || || | || ||| || ||||||| |||||||| ||||||||| Sbjct 867022 GCCTTTTGGTACTCACCGACCCTCCTCTCAAAGAAGTTGGCCTTGCCCTGAAGCGAGATC 867081 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTT-TTCGCATCCGAGCGACG 868808 | |||||| | | || ||| || | | ||||||||||| ||| | || || ||| Sbjct 867082 ATCTCCATGAA-GTCAAAGGGCTGCGACACGTTGTAGTGCTTCTTCTC-GCCAAGTGACA 867139 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | ||||| ||||| || || ||||||||||||| ||| | ||||||||||| | Sbjct 867140 CAAGCAGTCGGTCCGCAACGAACTCGATGTACTCTGTCATCAACTTCGCGTTCATGCCAA 867199 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGC-CTCGACG 868927 |||| || || |||| | || | |||||| |||||| || || || ||| ||| Sbjct 867200 TGAGTCTTACTGGAAGCGCGTGGCAGATAAACTCGCGCTCGATGTCCACCGCGCTC-ACG 867258 Query 868928 ATGATCTGCCTGGGCACG-TCGGCCGAGGGCTTG---TTGACGAGCATCGTGTAGAGCAG 868983 ||||||| || | | || ||| ||| ||||| |||| | | |||| ||||| Sbjct 867259 ATGATCT-CCAGCACGCGCTCGCGCGACAGCTTGTTCTTGATGTACGAGTTGTACAGCAG 867317 Query 868984 GCAGGCAAAGTCGCAGTGCA 869003 ||||| || ||| ||||| Sbjct 867318 ACAGGCGAAATCGGTGTGCA 867337 Score = 111 bits (122), Expect = 2e-18 Identities = 211/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || | ||| | ||||| || | | |||| | || | Sbjct 867619 GAGTGGATGTTCTCCATCATCAGCTGCAGCCCGTAGAAAAATCGCGCCTCCGGTACCTTC 867678 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || || |||||||| |||| ||||| |||||||| |||||| |||| || Sbjct 867679 ACATCGTTTATGAACCGCTGCGCCAAATTCTCCATGACGATGCCATCGCTGCCGGCAAAG 867738 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || || |||||||| || ||||| |||| || |||||||| | |||||| Sbjct 867739 AATGCAAGCACGTGCTTAATGAAGTGCTGCTCATCCGCGCTGAGCTTCGCCCAGTCTCTC 867798 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 ||||| || | ||| ||||| || | |||||||| || ||| | |||| | Sbjct 867799 ATGTCGTTGCCCAAGTCAACCTCATCCACCGTCCAGATGCAGCTCTCCTGCACCTTGTGC 867858 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGC 869932 |||| ||||| | ||| | ||| || ||||||||| ||||| || ||||| | | Sbjct 867859 ATCTTCCATATGTCGTGGCACTTGATGGGAAAGAGGACACAGCGGAAAGGATTGTCCCTC 867918 Query 869933 AACAGGGGTTC 869943 | ||| || || Sbjct 867919 AGCAGCGGCTC 867929 Score = 93.3 bits (102), Expect = 5e-13 Identities = 188/278 (68%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | || ||||| || | || || ||||| ||||| |||||| Sbjct 867340 CCCTCGTCGCGCGAGATGAGCTCATTGCTGAACGTCAGCCCCGGCATCAGGCCACGCTTC 867399 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 | ||||| || | || ||||| || ||||| || |||||||| || ||||||||| Sbjct 867400 CTCAGCCAGAATAGCGCACAGAAGGACCCGGAGAAGAATATGCCCTCCACCGCGGCAAAG 867459 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||||| || ||||| ||| | | | |||| | |||| |||||||||| Sbjct 867460 CCGATCAGTCGCTCCTGGAAG--CTTGCACCGCTCC----CAACCCACCGCATCGCCCAG 867513 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 || ||||| ||| | | || || || | ||| ||| | | || | |||| || Sbjct 867514 TCTGCCTTCTTCTGGATGCATGGAACGGTCTGGATCGCGTGCAGCAGTCGCACCTTCTCC 867573 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATA 869457 || ||| ||| ||| ||||| | ||| || ||||| Sbjct 867574 GCGCTGTCTGTGATATACGTGTCCAGCAGCAGAGAATA 867611 >seq25 Length=1382006 Score = 87.8 bits (96), Expect = 2e-11 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 732350 CGAGGTGCACCCGCTGCTCATGCTCGGGGCCTGCGCGTCCATCATCCCGTTCTCCAACCA 732409 |||| || ||||| | || ||||| ||||| ||||| ||||| | ||||||| Sbjct 39630 CGAGATGGACCCGTCTATGATTCTCGGTATTTGCGCCTCCATTATCCCTTATCCCAACCA 39571 Query 732410 CAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAG 732455 ||||||| | |||||||||| ||||||| | ||||||||||||||| Sbjct 39570 CAACCAGTCCCCGCGCAACACCTACCAGTCCGCCATGGGCAAGCAG 39525 Score = 87.8 bits (96), Expect = 2e-11 Identities = 118/162 (73%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 507104 GAGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAAC 507163 |||||| | ||||| ||| | ||| | | || || |||| ||||||||||||||| | Sbjct 1156290 GAGCGGCTGAAGGGAAAGTACGGTCGTCTGCGTGGAAATTTGATGGGCAAGCGCGTCGAT 1156231 Query 507164 TTTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTG 507223 ||| | ||||| | ||||||| | ||| || | |||||| | || ||||| ||||| Sbjct 1156230 TTTTCAGCGCGTACTGTCATCACCGGCGATCCGAACATCGACGTCGATGAGGTCGGCGTA 1156171 Query 507224 CCC-TATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGT 507264 ||| | | | | | || |||| | || || ||||||||||| Sbjct 1156170 CCCGTCTCTG-TGGCCATGACGTTGACTTTCCCCGAGCGCGT 1156130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106978435286003