Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq19 113 3e-19 >seq19 Length=1043608 Score = 113 bits (124), Expect = 3e-19 Identities = 417/646 (65%), Gaps = 13/646 (2%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 ||||| ||||||||||| || || || || | | ||| | || | ||| || | || Sbjct 411670 ACAAGTCGATTATCAAAGTCCTCGCCACCGAGGTGAGTGTCACCCGCCGTCGCCTTCACC 411611 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || ||| | | || || || ||||| || || || || | || Sbjct 411610 TCGAATACGCCGGATTCGATCGTCAGCAGCGTCACATCGAACGTGCCGCCGCCAAGGTCG 411551 Query 282302 AAAATAAGTACATTCATTTCT---TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358 || ||||| |||||| |||| || || || || | || ||||| | ||| Sbjct 411550 AAGATAAGCACATTCTTTTCCCCCTTCTCCCCTTTGCGGTCCATGCCGTACGCGATGGCA 411491 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || || || || || ||||| || | || ||| || ||||||||||| | || || ||| Sbjct 411490 GCGGCCGTCGGCTCGTTAATGATACGCATAACGTTGAGACCAGCAATGGTGCCGGCGTCT 411431 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || || || | || || || ||||||||||| |||||||| || |||||||| | Sbjct 411430 TTTGTTGCCTGGCGCTGCGAGTCATTAAAATATGCGGGAACAGTGATGACGGCATCCTTC 411371 Query 282479 ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAA-AATCATTGATGA 282537 || | || | || | ||||||| ||||| || || || | ||| | || Sbjct 411370 ACAGTGGTGCCGAGGTAGGACTCCGCTGTTTCCTTCATCTT-CTGAAGCACCATCGCAGA 411312 Query 282538 AATTTGTTCT-GGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTT 282596 ||| | ||| |||||| | | |||| || ||| || || || | || | Sbjct 411311 AATCTCCTCTGGGAGAAAAAT-CTTGCCCTCGCCTTGGTACTGCACCTCGATGACCGGCT 411253 Query 282597 T---ATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTT 282653 | || | || | |||||||| ||||| | |||||| || || || | Sbjct 411252 TCCCGTTCCGGAC---GGTCACTTTAAAGGGCCAGTGTTTCATGTCGGACTGCAGGTCGG 411196 Query 282654 GGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAA 282713 |||| | | | | |||||| | || || |||||||| | || ||| || || | Sbjct 411195 GGTCGTCGTACTTGCGACCAATCATGCGCTTCGCATCAAACACGGTGTTGTGCGGGTTCA 411136 Query 282714 CTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACAT 282773 || | || | || || ||||| |||||||| | || ||||| || || | |||| Sbjct 411135 TGGCCACCTGGTTCTTCGCCGCATCGCCAATCAGGCGCTCCGTCTCAGTGAAGGCCACAT 411076 Query 282774 ATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAAC 282819 | || || || ||||| ||||| ||||| || |||||||| || || Sbjct 411075 AGGACGGCGTCGTGCGGTTACCCTGATCGTTGGCAATAATATCCAC 411030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740534221378734