Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq21 217 1e-51 >seq21 Length=1031504 Score = 217 bits (240), Expect = 1e-51 Identities = 571/861 (66%), Gaps = 23/861 (3%) Strand=Plus/Minus Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCAC 147525 ||||| || ||||| || || ||||| | | | |||||| || || |||| |||| Sbjct 213771 GACGCGAGGTTGCACACCGCTGTCTCCCCCGGGCTAGTGTACTCGACAATCTCGGTGCAC 213712 Query 147526 AGGTTGCTGCATTTTATGACTCCCAAATTTTG-CTGATTGCTTTTCCGATTGCACGCGTC 147584 ||||| ||| || ||| |||||| || ||| || |||| || || ||| Sbjct 213711 AGGTTCGAGCACTTGATGG-TCCCAAGGTTCCTCTGGTTAGATTTCTCGTTACATTGGTC 213653 Query 147585 TTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATG 147641 |||||||| ||||| || ||||| ||||||| | ||| || | || ||||| Sbjct 213652 CTTGAAGAGAATGTAAGGGCCGCCCGTCTCGATTAGCGACTCCAGTATGGCAAACCA--- 213596 Query 147642 CAGGTCCTGCGCTCGCAC---CCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTA 147698 || |||||||| | | || || | | || |||||| ||||||| || ||| Sbjct 213595 CAAATCCTGCGCGGGTATAGTCCTCTTACCA---CGACCCTCGGCCTCGTACCTCTGGTA 213539 Query 147699 CAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACAT 147758 | | | ||| | |||||||||||||| || || || || | || || ||| Sbjct 213538 AAGCTCATTAAATGCCGCGCCGTAGCAATCGCTGAGACCCGGGCAGTTGTGGGGGTCCAT 213479 Query 147759 CAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGC 147818 |||| |||||| | || || || ||| ||| |||||||| || ||||| ||| | Sbjct 213478 GAGCGTCCACATCCCCTCGCTCTTCACCCGTGTCATGAACAGATCTGGGACCCAAAGCCC 213419 Query 147819 GTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCAC 147878 ||| | || ||||| || ||| || |||| ||||||| |||| || | Sbjct 213418 GTAGAAGAGGTCGCGGGCACGCTGATCATCCTTGCCCGTGTTGCGCTTCAGCAACAGGAA 213359 Query 147879 GCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTTCC 147938 || | | |||||||||||||| || |||| ||||| ||| | || || || ||||| || Sbjct 213358 GCCAAAAATGTCGGCGTGCCACGGCTCAAGGTAGATGGCGAAGGCGCCCTTGCGCTTACC 213299 Query 147939 G---CCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCC 147995 | |||||||| || | |||| | ||||||| || || |||| ||| || | || || Sbjct 213298 GCCACCCTGGTCCACGTAGCGCGCGGTGTTGTTGAAGACCCGCAACATCGGCACGAGCCC 213239 Query 147996 GCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTT 148055 | ||| || ||||| ||| || | |||||| || || | | |||||| | Sbjct 213238 GTTCGACGTACCGTTCGTGCCGGCAATGTAGCTGCCCTCCGCGCGGATGTTGTGCACATG 213179 Query 148056 AACGCCAATGCCGCCGCCGTACTTTGAT-ATGGCAGCGCAATCGCC--CAATGTCGTGTA 148112 | ||||||||| ||| | | ||||| | || ||| ||| | || | || ||| Sbjct 213178 CAGGCCAATGCCACCGGC-TGCTTTGCTGAT--CAGGGCACACTCCTTGAGCGTGTCGTA 213122 Query 148113 GATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAAT 148172 || || ||||||||||| | |||| ||| || ||| || || | ||||||||| | Sbjct 213121 AATACCCTCGATGCTGTCATCTTTGGATGCAACCAGAAAGCATGAGCTCATTTGCGGCTT 213062 Query 148173 CCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCAT 148232 |||| || || ||| || || ||| ||||||| || || ||| ||| ||||| Sbjct 213061 TGGCGTACCGGCATTGAAGAGAGTCGGAGTCGCGTGAGTGAAGAATCCTTGTGACATCAA 213002 Query 148233 GCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCAT 148292 | || || | ||| || | |||| | ||||||||||| || ||||| ||||| Sbjct 213001 GTTGTATGTGGAACGTACGTTCTCCAGGTCGGCACCGTGAATGCCAAGAGCGACACGCAT 212942 Query 148293 GAGCATGTGCTGTGGTCGTTC 148313 || ||||| || || || Sbjct 212941 ATACAGCTGCTGGGGGCGCTC 212921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476599528983240