Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq33 179 4e-40 >seq33 Length=510537 Score = 179 bits (198), Expect = 4e-40 Identities = 398/587 (68%), Gaps = 20/587 (3%) Strand=Plus/Minus Query 146929 ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGG 146988 |||||| || | || ||||| ||||| || ||||||||||| | || || || || Sbjct 366724 ACGTGGCTGCGATACACGTGAGCGTCACCGAGGGTGTGCACGAGCTCGCCGGGTCGTAGC 366665 Query 146989 CCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACC 147048 || ||| | | || | | | ||||||||| || ||| ||| ||||| ||||| || Sbjct 366664 CCTGTCGCCTTCGCAATAAGGATGGTGAGCAGAGAATAGGAGGCGATGTTAAAGGGAACG 366605 Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC-CCGTC-----G 147102 || || |||||||| | ||| | ||||||| | ||| || |||||| |||| | Sbjct 366604 CCGAGACCCATGTCACACGAACGTTGGTACATCATGCAGGACAGCTCCTTCGTCTCCGTG 366545 Query 147103 GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCG 147162 |||||| ||||| || | |||||||||||| |||||||| ||||| |||| Sbjct 366544 TTCACGTAGAACTGAGCGAGCAAGTGGCACGGCGGGAGCGCCATCTTGGGCA---ACGCG 366488 Query 147163 ---GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTC 147218 ||||||||||| | || | || || | | || | ||||| |||| | || Sbjct 366487 CTTGGGTTCCAGGCAGTGAAGAGGAGACGGC-GATCGTTCGGGTTTTTCTTGAGGGTCTC 366429 Query 147219 GATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTA 147278 || || || | | ||| |||||||| | ||| ||||||||| | | || ||| Sbjct 366428 GACAATGTACTTGATCTGATCCACGCCTTCGCCATCGTAGTTTGCATCAAACCCCCTGTA 366369 Query 147279 CCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCT---T 147335 | ||||| || || | ||||||||||||||| ||||| || || || | || | Sbjct 366368 CTCCGCCCCGAAATGACGCCACTGGAAGCCGTATACTGGTCCGAGATC-CATTTCTTTAT 366310 Query 147336 TCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCC 147395 ||| || ||| | | || | | | ||| |||||| | || |||| ||||||| || Sbjct 366309 TCTCTGTGAG-ACCACGACTG-TCGAGGAACTCGCGCGAGCCGTTACCGTCCCAAATATG 366252 Query 147396 CACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 | ||||| | | ||| || | | |||| ||| |||| ||||||||||| || Sbjct 366251 GATATCCTTGTCCGCGAGGATCTGCGCATTCGTGTTGCCGCGGAGAAACCAGAGCAGTTC 366192 Query 147456 CTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 ||| | || || | ||||||||| | |||||| |||| || |||| Sbjct 366191 CTCACACACACCGCGCCAAAAGACACGCTTGGTCGTCAACAACGGGA 366145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583473711837600