Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq15 206 4e-47 seq20 185 1e-40 seq21 150 3e-30 seq36 105 1e-16 seq25 91.5 2e-12 seq1733 87.8 3e-11 seq11 87.8 3e-11 >seq15 Length=659801 Score = 206 bits (228), Expect = 4e-47 Identities = 407/595 (68%), Gaps = 9/595 (2%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 || ||||||| | || ||||| ||||| ||||| ||||||||| ||||| Sbjct 502503 GAACCGCTGCAACAGGAGAACCCTTTCCGCTACGTCCTCTTCCCCATCAAGTACCATGAT 502444 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 |||||| | |||| || || ||| || | | ||||| | |||||| ||||| | Sbjct 502443 ATATGGCGCAAGTAC-AAGGAGCAGGAGAGCTGCATCTGGACGGTGGAGGAGATCGACTT 502385 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 ||| ||||| | |||||||| |||| |||| || |||| || |||||||| || Sbjct 502384 GGGCAACGACATGAAGGACTGGGTGACGCTCAGCGCGGATGAGCAGCACTTCATCAAACA 502325 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 ||| || || || || ||||| ||||||||||||||| ||||| ||||| || | Sbjct 502324 CGTGCTTGCATTCTT-CGCCGGCAGCGATGGCATCGTCATGGAGAATCTGGCGCAGCGGT 502266 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | ||||| || || | | || ||||| || || |||||||||||| | || | Sbjct 502265 TCATGAACGATGTGAAGGTACCGGAGGCGCGGGCCTTCTACGGGTTCCAGCTGATGATGG 502206 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCG 1456075 | ||||||||||| || || || || | ||| | ||||| || ||| |||| | | Sbjct 502205 AGAACATCCACTCGGAGACGTATTCTGTGCTGCTGGACACGTATATCACGGACAGCGAGG 502146 Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 ||||| | || | | ||| ||| | || || || | | ||| ||||| |||| Sbjct 502145 AGAAGCTGCGACTGCTGCACGCGATCCAGACCGTCCCATGCATCCAGAAGAAGGCAGACT 502086 Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTT 1456195 |||||||| |||||| |||| | | | ||| ||||| || ||||||| Sbjct 502085 GGGCGATGCGGTGGAT----TGGGAGCG-GTACAAGCTTCCAGGAGCGACTGATCGGCTT 502031 Query 1456196 TGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAA 1456254 |||||| || |||||||| || ||||| || ||||| || | || ||| | ||||| Sbjct 502030 TGCCGCGGTGGAGGGCATATTCTTCTCCGGGTCCTTCTGTGCGCTGTTCTGGATGAAGAA 501971 Query 1456255 GCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||||||| ||||| || || | || ||||| || | ||| |||||||| Sbjct 501970 GCGCGGCCTGATGCCGGGGCTGACG-TTCAGCAATGAGCTCATCTCGCGCGACGA 501917 Score = 120 bits (132), Expect = 4e-21 Identities = 233/331 (70%), Gaps = 15/331 (5%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAA---CAAGCCGTCGACCG 1456508 ||||| || |||||||||||||| |||| || | |||| ||||| |||| || Sbjct 501911 TGCACACCGATTTTGCCTGTCTGCTGTACAACTCGCACATCAAGAACAAGCTGTCGCGCG 501852 Query 1456509 ACGTGCCCAA-GCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAG 1456567 | | || | | |||||||||| || || || || |||||| |||||| || |||| Sbjct 501851 A-GCGCGTACTGGAGATCATCGTGGACGCGGTGGACATCGAGCGCGAGTTTATCTGCGAC 501793 Query 1456568 TCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATT 1456627 |||| || || ||||| |||||||||| | ||| ||| | ||||| | | | Sbjct 501792 GCGCTTCCAGTAAGACTCATTGGCATGAACG-CGGAGCTGATGGCACGTTACATCG-AGT 501735 Query 1456628 TTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGGCC 1456684 |||| || ||||| ||||| | | | || ||| | ||||||||||||| || | || | Sbjct 501734 TTGTTGCGGACCGACTGCTTGTGTCACTTGGC-GAGGAGAAGCACTACAACGTGTCG--C 501678 Query 1456685 AACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGC 1456744 | ||| || | | |||||| |||||||||| |||||||||| || || || ||| Sbjct 501677 AGCCCTTTGAC-TTCATGGAGATGATCTCGCTTCAGGGCAAGACGAATTTCTTTGAGAAG 501619 Query 1456745 CGCGTG-GCGAGTACGCCAAGGCCGGCGTCA 1456774 ||| |||||||| ||||| || |||| Sbjct 501618 AAGGTGAGCGAGTACCAAAAGGCTGGTGTCA 501588 >seq20 Length=978369 Score = 185 bits (204), Expect = 1e-40 Identities = 402/595 (68%), Gaps = 9/595 (2%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||||||||| | || || || ||||| |||||| || |||||| | ||| Sbjct 867929 GAGCCGCTGCTGAGGGACAATCCTTTCCGCTGTGTCCTCTTTCCCATCAAGTGCCACGAC 867870 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 |||||| | ||| || || | ||| || | | ||||| | || ||||| ||| | Sbjct 867869 ATATGGAAGATGCAC-AAGGTGCAGGAGAGCTGCATCTGGACGGTGGATGAGGTTGACTT 867811 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 ||| ||||| | |||||| | ||| |||| || |||| || ||||| ||||| Sbjct 867810 GGGCAACGACATGAGAGACTGGGCGAAGCTCAGCGCGGATGAGCAGCACTTCATTAAGCA 867751 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 ||| || || || ||| |||| ||||||||||||||| ||||| |||| || | Sbjct 867750 CGTGCTTGCATTCTTT-GCCGGCAGCGATGGCATCGTCATGGAGAATTTGGCGCAGCGGT 867692 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | || || || || | | || ||||| || || || |||||| | ||| | || | Sbjct 867691 TCATAAACGATGTGAAGGTACCGGAGGCGCGATTTTTCTACGGGCTGCAGCTGATGATGG 867632 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCG 1456075 | ||||||||||| |||| || || || ||| | ||||| || ||| ||| | | Sbjct 867631 AGAACATCCACTCAGAAATGTATTCTCTGCTGCTGGACACGTATATCACAGACAGCGCGG 867572 Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 |||||| | || | | ||| ||| | || || || | | ||| ||||| |||| Sbjct 867571 AGAAGGTGCGACTGCTGCACGCGATCCAGACCGTTCCATGCATCCAGAAGAAGGCAGACT 867512 Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTT 1456195 |||||||| |||| | |||| | | | ||| ||||| || ||||||| Sbjct 867511 GGGCGATGCGGTGGGT----TGGGAGCG-GTGCAAGCTTCCAGGAGCGACTGATCGGCTT 867457 Query 1456196 TGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAA 1456254 |||||| || |||||||| || ||||| || ||||| || | || ||||| | ||| Sbjct 867456 TGCCGCGGTGGAGGGCATATTCTTCTCCGGGTCCTTCTGTGCGCTATTCTGGCTGAGGAA 867397 Query 1456255 GCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||| ||||| ||||| || || | || ||||| || | ||| |||||||| Sbjct 867396 GCGTGGCCTGATGCCGGGGCTGACG-TTCAGCAATGAGCTCATCTCGCGCGACGA 867343 Score = 107 bits (118), Expect = 3e-17 Identities = 233/334 (70%), Gaps = 21/334 (6%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAA---CAAGCCGTCGACCG 1456508 ||||| || || ||||||||||| |||| | | |||| ||||| |||| || Sbjct 867337 TGCACACCGATTTCGCCTGTCTGCTGTACAACTCGTACATCAAGAACAAGCTGTCGCGCG 867278 Query 1456509 A---CGTGCCCAAGCAGATCATCGTCGAG-GCCGTCGAGATCGAGAAAGAGTTTGTCAGC 1456564 | ||||| | |||||||||| ||| || || || |||||| |||||| || || Sbjct 867277 AGCGCGTGCT---GGAGATCATCGT-GAGCGCGGTGGACATCGAGCGCGAGTTTATCTGC 867222 Query 1456565 GAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGA 1456624 | |||| || || ||||| ||||||||||| | | | ||| ||||||| | Sbjct 867221 CACGCGCTTCCAGTAAGACTCATTGGCATGAACGCGA-AGTTGATGACAGAGTACATCG- 867164 Query 1456625 ATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACG 1456681 | || || || ||||| ||||| | | | || ||| | | ||||||||||| || | || Sbjct 867163 AGTTCGTTGCGGACCGACTGCTTGTGTCACTTGGC-GAGAAGAAGCACTACAACGTGTCG 867105 Query 1456682 GCCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 || ||| || | | |||||| |||||||||| |||||||| ||||||| || ||| Sbjct 867104 --CAGCCCTTTGAC-TTCATGGAGATGATCTCGCTTCAGGGCAAGGCCAACTTCTTTGAG 867048 Query 1456742 CGCCGCGT-GGCGAGTACGCCAAGGCCGGCGTCA 1456774 | | || || |||||| ||||| || |||| Sbjct 867047 AGGAGGGTCGGTGAGTACCAAAAGGCTGGTGTCA 867014 >seq21 Length=1031504 Score = 150 bits (166), Expect = 3e-30 Identities = 273/393 (69%), Gaps = 21/393 (5%) Strand=Plus/Plus Query 259793 GTCGAGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGAC 259852 || ||||| |||||| | || ||||||||||| |||||| | | || ||||||| Sbjct 212918 GTGGAGCGCCCCCAGCAGCTGTATATGCGTGTCGCTCTTGGCATTCACGG---TGCCGAC 212974 Query 259853 GTCGACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTC 259912 |||||| |||| | |||| ||| | ||||| || || ||| Sbjct 212975 ------------CTGGAGAACGTACGTTCCACATACAACTTGATGTCACAAGGATTCTTC 213022 Query 259913 ACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCG-TCGT 259970 || ||| ||||| || || ||||| |||||||| ||||| ||||| ||| | || | Sbjct 213023 AC-TCACGCGACTCCGACTCTCTTCAATGCCGGTACGCCAAAGCCGCA-AATGAGCTCAT 213080 Query 259971 GCTTTCTGTTGGACATG-AAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 |||||||| | | ||| || | || |||||||| || || |||||||||||| || Sbjct 213081 GCTTTCTGGTTG-CATCCAAAGATGACAGCATCGAGGGTATTTACGACACGCTCAAGGAG 213139 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 || || || ||| ||| || ||||| ||||| || | | ||||| | ||||| Sbjct 213140 TGTGCCCTGATCAGCAAAGCAGCCGGTGGCATTGGCCTGCATGTGCACAACATCCGCGCG 213199 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 | |||| |||| | || ||||| ||||| ||| ||||| || ||||| ||| | || Sbjct 213200 GAGGGCAGCTACATTGCCGGCACGAACGGTACGTCGAACGGGCTCGTGCCGATGTTGCGG 213259 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 || || ||| |||| ||||||||||| |||||| Sbjct 213260 GTCTTCAACAACACCGCGCGCTACGTGGACCAG 213292 >seq36 Length=555156 Score = 105 bits (116), Expect = 1e-16 Identities = 128/169 (76%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| || |||| ||||| | ||| ||||| | |||| Sbjct 497680 GATCATGAACTCGTACGTCAACGACGTGTTCGAGCGCATTGCCACAGAGGCTGCGTCGAT 497621 Query 725035 TGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCC 725094 || ||| | |||||| |||| | ||| |||||||| | |||||||| ||||||| Sbjct 497620 TGTT-CGCACGAACAAGAAGCGCACGTTGGGCGCGCGCGAGGTGCAGACCGCGGTGCGCC 497562 Query 725095 TGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| |||| || || || | ||||||| | |||||||||||| Sbjct 497561 TTGTGCTGC-CGGCAGAGCTCGCAAAGCACGCCATGGCCGAGGGCACCA 497514 Score = 105 bits (116), Expect = 1e-16 Identities = 128/169 (76%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| || |||| ||||| | ||| ||||| | |||| Sbjct 498575 GATCATGAACTCGTACGTCAACGACGTGTTCGAGCGCATTGCCACAGAGGCTGCGTCGAT 498516 Query 725035 TGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCC 725094 || ||| | |||||| |||| | ||| |||||||| | |||||||| ||||||| Sbjct 498515 TGTT-CGCACGAACAAGAAGCGCACGTTGGGCGCGCGCGAGGTGCAGACCGCGGTGCGCC 498457 Query 725095 TGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| |||| || || || | ||||||| | |||||||||||| Sbjct 498456 TTGTGCTGC-CGGCAGAGCTCGCAAAGCACGCCATGGCCGAGGGCACCA 498409 >seq25 Length=1382006 Score = 91.5 bits (100), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1601359 CTGCTTGCCCATGGCCGTCTGGTAGATGTTGCGCGGCGCCTGGTTGTGGTTGGAAAACGG 1601418 ||||||||||||||| | ||||||| |||||||||| | |||||||||||||| | | || Sbjct 39525 CTGCTTGCCCATGGCGGACTGGTAGGTGTTGCGCGGGGACTGGTTGTGGTTGGGATAAGG 39584 Query 1601419 GATGATGGACGCGCA 1601433 ||| ||||| ||||| Sbjct 39585 GATAATGGAGGCGCA 39599 >seq1733 Length=1237 Score = 87.8 bits (96), Expect = 3e-11 Identities = 125/169 (74%), Gaps = 8/169 (5%) Strand=Plus/Plus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| || |||| ||||| | || ||||| | |||| Sbjct 553 GATCATGAACTCGTACGTCAACGACGTGTTCGAGCGCATTGCGACAGAGGCTGCGTCGAT 612 Query 725035 TG-GCGCGC-TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 || ||| | ||| ||||| |||| | ||| |||||||| | ||||| || ||||| Sbjct 613 TGTTCGCACGAACAAAAAGCG---CACGTTGGGCGCGCGCGAGGTGCAGACGGCGGTGCG 669 Query 725093 CCTGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| |||| || || || | ||||||| | | |||||||| Sbjct 670 CCTTGTGTTGC-CGGCTGAGCTCGCGAAGCACGCCATGGCTGAGGGCAC 717 >seq11 Length=622540 Score = 87.8 bits (96), Expect = 3e-11 Identities = 125/169 (74%), Gaps = 8/169 (5%) Strand=Plus/Minus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| || |||| ||||| | || ||||| | |||| Sbjct 6251 GATCATGAACTCGTACGTCAACGACGTGTTCGAGCGCATTGCGACAGAGGCTGCGTCGAT 6192 Query 725035 TG-GCGCGC-TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 || ||| | ||| ||||| |||| | ||| |||||||| | ||||| || ||||| Sbjct 6191 TGTTCGCACGAACAAAAAGCG---CACGTTGGGCGCGCGCGAGGTGCAGACGGCGGTGCG 6135 Query 725093 CCTGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| |||| || || || | ||||||| | | |||||||| Sbjct 6134 CCTTGTGTTGC-CGGCTGAGCTCGCGAAGCACGCCATGGCTGAGGGCAC 6087 Score = 87.8 bits (96), Expect = 3e-11 Identities = 125/169 (74%), Gaps = 8/169 (5%) Strand=Plus/Minus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| || |||| ||||| | || ||||| | |||| Sbjct 7169 GATCATGAACTCGTACGTCAACGACGTGTTCGAGCGCATTGCGACAGAGGCTGCGTCGAT 7110 Query 725035 TG-GCGCGC-TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 || ||| | ||| ||||| |||| | ||| |||||||| | ||||| || ||||| Sbjct 7109 TGTTCGCACGAACAAAAAGCG---CACGTTGGGCGCGCGCGAGGTGCAGACGGCGGTGCG 7053 Query 725093 CCTGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| |||| || || || | ||||||| | | |||||||| Sbjct 7052 CCTTGTGTTGC-CGGCTGAGCTCGCGAAGCACGCCATGGCTGAGGGCAC 7005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177622250849358