Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq36 91.5 1e-13 seq25 87.8 2e-12 seq21 84.2 2e-11 >seq36 Length=555156 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||||| |||| |||| || | ||| || || || ||||| |||||||| Sbjct 340562 GCCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCCGC 340621 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | || || ||||| || |||||| | || || ||||| || ||||| || Sbjct 340622 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 340681 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||||| || | | || | || || | | ||||| Sbjct 340682 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTATCGCTCGACTCAAC 340741 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || | || | ||||| |||||||| ||||||||||| ||||| Sbjct 340742 CTCGAGCGCAATCGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 340789 >seq25 Length=1382006 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||||| |||| |||| || ||||| || || || || || |||||||| Sbjct 844022 GCCACCGCGCAGGCGCAGCACCAGGTGCAACGTGGACTCCTTCTGGATGTTGTAGTCCGC 844081 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || |||| | || || ||||| || |||||| | || || ||||| || ||||| || Sbjct 844082 CAGCGTGCGACCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 844141 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| || | | || | || || | | || || Sbjct 844142 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTCTCGATCGTATCGCTCGACTCGAC 844201 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| || | || | ||||| ||||| || ||||||||||| ||||| Sbjct 844202 TTCGAGCGCAATCGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 844249 >seq21 Length=1031504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 173/257 (67%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 131741 AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA 131800 ||| | |||||||| || ||||| || || | || | || | ||||| ||||||||| Sbjct 213360 AAGCCAAAAATGTCGGCGTGCCACGGCTCAAGGTAGATGGCGAAGGCGCCCTTGCGCTTA 213301 Query 131801 CCGCCT---TGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAA 131857 ||||| || | || | || | |||||||| | || |||||||| ||| | | Sbjct 213300 CCGCCACCCTGGTCCACGTAGCGCGCGGTGTTGTTGAAGACCCGCAACATCGGCACGAGC 213241 Query 131858 CCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACG 131917 ||||| | | || || |||| |||||||||||| | || | ||| ||||| || Sbjct 213240 CCGTTCGACGTACCGTTCGTGCCGGCAATGTAGCTGCCCTCCGCGCGGATGTTGTGCACA 213181 Query 131918 TTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAG 131977 | || ||||| || ||| | ||| ||| || || || | | || |||| || Sbjct 213180 TGCAGGCCAATGCCACCGGCTGCTTTGCTGATCAGGGCACACTCCTTGAGCGTGTCGTAA 213121 Query 131978 ATACCTTCCACGCTGTC 131994 ||||| || | |||||| Sbjct 213120 ATACCCTCGATGCTGTC 213104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424924254558408