Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq21 102 1e-16 >seq21 Length=1031504 Score = 102 bits (112), Expect = 1e-16 Identities = 497/782 (64%), Gaps = 9/782 (1%) Strand=Plus/Plus Query 104288 ACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCT 104347 |||||| || |||||| ||||| | |||| |||||| || || || ||||||||||| Sbjct 212993 ACATACAACTTGATGTCACAAGGATTCTTCACTCACGCGACTCCGACTCTCTTCAATGCC 213052 Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 ||||| |||| || |||||| | ||||| || | || ||| || ||| ||| Sbjct 213053 GGTACGCCAAAGCCGCAAATGAGCTCATGCTTTCTGGTTGCATCCAAAGATGACAGCATC 213112 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATC-TCAAAGTGGGCTGGGGGTAT 104466 | ||||| || | || || | ||||||||| | ||| ||||| || || || || Sbjct 213113 GAGGGTATTTACGACACGCTCAAGGAGTGTGCCCTGATCAGCAAAG-CAGCCGGTGGCAT 213171 Query 104467 TGGGATGCACATCCATGATGTGAGAGC-CAATAAATCTCGTATTCGGGGGACAAATGGTC 104525 ||| |||| | || | | | || | | || ||| || || || ||| Sbjct 213172 TGGCCTGCATGTGCACAACATCCGCGCGGAGGGCAGCT-ACATTGCCGGCACGAACGGTA 213230 Query 104526 AATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATC 104585 || | || | | || ||| | || || || ||| ||| |||||||| || | | Sbjct 213231 CGTCGAACGGGCTCGTGCCGATGTTGCGGGTCTTCAACAACACCGCGCGCTACGTGGACC 213290 Query 104586 AAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATA 104642 | | ||| || || ||||| | |||| |||| |||||||| |||||||| || | Sbjct 213291 AGGGTGGCGGTAAGCGCAAGGGCGCCTTCGCCATCTACCTTGAGCCGTGGCACGCCGACA 213350 Query 104643 TCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATC 104702 | | | ||||| | || | |||| || | || || ||| |||||| | Sbjct 213351 TTTTTGGCTTCCTGTTGCTGAAGCGCAACACGGGCAAGGATGATCAGCGTGCCCGCGACC 213410 Query 104703 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAAT- 104761 |||||| || || ||| | |||||||| |||||| | | | ||| ||| | || || Sbjct 213411 TCTTCTACGGGCTTTGGGTCCCAGATCTGTTCATG-ACACGGGTGAAGAGCGAGGGGATG 213469 Query 104762 TGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTT 104821 ||| | ||| | || |||| || |||||| |||| | || | || ||| Sbjct 213470 TGGACGCTCATGGACCCCCACAACTGCCCGGGTCTCAGCGATTGCTACGGCGCGGCATTT 213529 Query 104822 GAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCC 104881 | | |||||| | |||||||| || ||||| | | ||| | || || Sbjct 213530 AATGAGCTTTACCAGAGGTACGAGGCCGAGGGTCGTGGTAAGAGGACTATACCCGCGCAG 213589 Query 104882 GATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTAC 104941 ||| ||||| || || || |||| | || |||||| || || ||||| || | | Sbjct 213590 GATTTGTGGTTTGCCATACTGGAGTCGCTAATCGAGACGGGCGGCCCTTACATTCTCTTC 213649 Query 104942 AAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAAT 105001 || ||| |||||| | || ||| || | ||| | || |||||| | || || Sbjct 213650 AAGGACCAATGTAACGAGAAATCTAACCAGAGGAACCTTGGGACCATCAAGTGCTCGAAC 213709 Query 105002 CTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCA 105061 || || || || || | || | || | | ||||| || ||||| |||||||| Sbjct 213710 CTGTGCACCGAGATTGTCGAGTACACTAGCCCGGGGGAGACAGCGGTGTGCAACCTCGCG 213769 Query 105062 TC 105063 || Sbjct 213770 TC 213771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583246517401160