Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq33 87.8 2e-12 >seq33 Length=510537 Score = 87.8 bits (96), Expect = 2e-12 Identities = 210/317 (66%), Gaps = 12/317 (4%) Strand=Plus/Plus Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCG 34462 || || || ||||| ||||||||| | || || ||||||||||| ||||| || || Sbjct 366327 GGACCAGTATACGGCTTCCAGTGGCGTCATTTCGGGGCGGAGTACAGGGGGTTTGATGCA 366386 Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAAC 34522 |||| || | || | ||| ||| | ||||| | |||| ||| | ||| ||| Sbjct 366387 AACTACGATGGCGAAGGCGTGGATCAGATCAAGTACATTGTCGAGACCCTCAAGAAAAAC 366446 Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 || | || | | || | | || |||||||| | | | || ||||||| Sbjct 366447 CCGAACGATCGCCGTCTCCTCTTCACTGCCTGGAACCCAAGCGCGTTGCCCAAGATGGCG 366506 Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT-----CG----CGAATGGGGAGCTG 34633 ||||| ||||||||| ||| || |||||||| || |||| ||||||| Sbjct 366507 CTCCCGCCGTGCCACTTGCTCGCTCAGTTCTACGTGAACACGGAGACGAA---GGAGCTG 366563 Query 34634 TCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCT 34693 |||||| | | || ||||| ||| | |||||||| | || || || || ||||| || Sbjct 366564 TCCTGCATGATGTACCAACGTTCGTGTGACATGGGTCTCGGCGTTCCCTTTAACATCGCC 366623 Query 34694 AGTTACGCTCTGCTCAC 34710 || |||||||||| Sbjct 366624 TCCTATTCTCTGCTCAC 366640 Score = 87.8 bits (96), Expect = 2e-12 Identities = 210/317 (66%), Gaps = 12/317 (4%) Strand=Plus/Minus Query 6635 GTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGT 6694 |||||||||| || || ||||| || || || || | |||||||| | ||| ||| Sbjct 366640 GTGAGCAGAGAATAGGAGGCGATGTTAAAGGGAACGCCGAGACCCATGTCACACGAACGT 366581 Query 6695 TGATAGAGCTGGCAGGACAGCTCCCCATTCG----CG-----ACGTAGAATTGGCAGAGG 6745 || || | | ||||||||||||| |||| || |||||||| || ||| Sbjct 366580 TGGTACATCATGCAGGACAGCTCC---TTCGTCTCCGTGTTCACGTAGAACTGAGCGAGC 366524 Query 6746 GTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACG 6805 ||||||||| |||||||||||| || | | | |||||||| || | | | Sbjct 366523 AAGTGGCACGGCGGGAGCGCCATCTTGGGCAACGCGCTTGGGTTCCAGGCAGTGAAGAGG 366464 Query 6806 ATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCT 6865 | | | || | ||||| ||| | ||| |||| | ||||| | ||| ||| | Sbjct 366463 AGACGGCGATCGTTCGGGTTTTTCTTGAGGGTCTCGACAATGTACTTGATCTGATCCACG 366404 Query 6866 CCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925 || | || |||| || || ||||| ||||||||||| || || | ||||||| Sbjct 366403 CCTTCGCCATCGTAGTTTGCATCAAACCCCCTGTACTCCGCCCCGAAATGACGCCACTGG 366344 Query 6926 AACCCGTAGACCGGGCC 6942 || ||||| || || || Sbjct 366343 AAGCCGTATACTGGTCC 366327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448251423174480