Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq33 104 2e-17 >seq33 Length=510537 Score = 104 bits (114), Expect = 2e-17 Identities = 170/242 (70%), Gaps = 10/242 (4%) Strand=Plus/Minus Query 29669 TAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29728 || |||||||| || || |||||||| || | ||| || ||| |||||| || | | Sbjct 366712 TACACGTGAGCGTCACCGAGGGTGTGCACGAGCTCGCCGGGTCGTAGCCCTGTCGCCTTC 366653 Query 29729 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATG 29788 || || | | ||||| ||||| ||| ||||||||||||||| || ||||| |||||| Sbjct 366652 GCAATAAGGATGGTGAGCAGAGAATAGGAGGCGATGTTAAAGGGAACGCCGAGACCCATG 366593 Query 29789 TCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCT-CTCCGTC-----GCTCACGTAAAAC 29842 || | || | ||||| | | ||| || |||| || |||| | ||||||| ||| Sbjct 366592 TCACACGAACGTTGGTACATCATGCAGGACAGCTCCTTCGTCTCCGTGTTCACGTAGAAC 366533 Query 29843 TGACACATGGCA--TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGG 29900 ||| | ||| |||||||| || || ||||| ||| | | |||||||||| Sbjct 366532 TGAGCGA--GCAAGTGGCACGGCGGGAGCGCCATCTTGGGCAACGCGCTTGGGTTCCAGG 366475 Query 29901 CA 29902 || Sbjct 366474 CA 366473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406153502726674