Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq30 183 3e-41 seq36 179 3e-40 seq25 165 8e-36 >seq30 Length=3727717 Score = 183 bits (202), Expect = 3e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | |||||| ||||||||| ||||||||| ||||| ||||| | Sbjct 1375403 GCCGCCGCGCAGACGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 1375462 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || | |||||||||||||| || ||||||||||| ||||||| || Sbjct 1375463 CAGCGTGCGGCCCTCCGCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGG 1375522 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| | | | ||||||||||||||||| Sbjct 1375523 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATCGTGTCGCTCGACTCCAC 1375582 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || || ||||||||||| ||||| ||||||||| Sbjct 1375583 CTCGAGCGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 1375631 Score = 179 bits (198), Expect = 3e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||||||| ||||||||| ||||| ||||| | Sbjct 1378839 GCCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 1378898 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || |||||||||||||| || ||||||||||| ||||||| || Sbjct 1378899 CAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGG 1378958 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| | | | ||||||||||||||||| Sbjct 1378959 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATCGTGTCGCTCGACTCCAC 1379018 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || || ||||||||||| ||||| ||||||||| Sbjct 1379019 CTCGAGCGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 1379067 Score = 179 bits (198), Expect = 3e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||||||| ||||||||| ||||| ||||| | Sbjct 1379067 GCCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 1379126 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || |||||||||||||| || ||||||||||| ||||||| || Sbjct 1379127 CAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGG 1379186 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| | | | ||||||||||||||||| Sbjct 1379187 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATCGTGTCGCTCGACTCCAC 1379246 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || || ||||||||||| ||||| ||||||||| Sbjct 1379247 CTCGAGCGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 1379295 Score = 179 bits (198), Expect = 3e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||||||| ||||||||| ||||| ||||| | Sbjct 1380387 GCCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 1380446 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || |||||||||||||| || ||||||||||| ||||||| || Sbjct 1380447 CAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGG 1380506 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| | | | ||||||||||||||||| Sbjct 1380507 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATCGTGTCGCTCGACTCCAC 1380566 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || || ||||||||||| ||||| ||||||||| Sbjct 1380567 CTCGAGCGCAATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 1380615 >seq36 Length=555156 Score = 179 bits (198), Expect = 3e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| ||||||||| ||||||||||||||| ||||| | Sbjct 340562 GCCACCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCCGC 340621 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| | || || ||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 340622 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 340681 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| | | | || ||||||||||| || Sbjct 340682 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGTATCGCTCGACTCAAC 340741 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || ||||| || || ||||| ||||| || || ||||||||| Sbjct 340742 CTCGAGCGCAATCGTCTTGCCGGTCAGAGTCTTCACAAAGATCTGCATG 340790 >seq25 Length=1382006 Score = 165 bits (182), Expect = 8e-36 Identities = 176/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | |||||| |||| |||| ||||||||| ||||| ||||| | Sbjct 844022 GCCACCGCGCAGGCGCAGCACCAGGTGCAACGTGGACTCCTTCTGGATGTTGTAGTCCGC 844081 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || ||||||||||||||||| ||||||||||| ||||||| ||| Sbjct 844082 CAGCGTGCGACCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGG 844141 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | ||| | | | || ||||||||||| | Sbjct 844142 GATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACATTCTCGATCGTATCGCTCGACTCGA 844200 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || ||||| || || ||||||||||| || || ||||||||| Sbjct 844201 CTTCGAGCGCAATCGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCATG 844250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462292679330800