Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= NC_001659.2 Length=170101 Score E Sequences producing significant alignments: (Bits) Value seq36493 109 6e-19 >seq36493 Length=442 Score = 109 bits (120), Expect = 6e-19 Identities = 172/243 (71%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 51356 TTGTTTTAA-CGAAAGTACTTCTCCAGCGGTACAGACATTGGCGGTAATGGCTAACTGTT 51414 ||||||||| || ||||| || |||| |||| |||||||| || || || | |||| Sbjct 165 TTGTTTTAAGCGGTAGTACATCAGCAGCTATACAAACATTGGCAGTTATTGCCAGTTGTT 224 Query 51415 TAGACATACCTACTTTTTCACCAGTATCGGCTGACTGGGCTACGCAGATGTATCCAGGAT 51474 | ||| |||||||||||||| | ||| || ||| || | || |||||||| | | Sbjct 225 TTCTCATTCCTACTTTTTCACCTGAATCTGCACTCTGTGCAATACAAATGTATCCTGTGT 284 Query 51475 AAGATGCGTGCACGCGACGCATCATGTCAGCCCTTTCTGTTTGTTTGGATGCGTTGGTGG 51534 ||| | || || || | |||||| ||||||| || ||||| ||||| | || | Sbjct 285 AAGTAGGATGTACTCGTCTCATCATATCAGCCCGCTCAGTTTGCTTGGAAGAATTACCAG 344 Query 51535 TGTTATGAGTATTTACCGTACGCAACG--CTGAAATCGTATTTAATAAATTTTTTCTTTC 51592 || |||||| ||| || || |||| |||||| ||||| | | |||||| ||||| Sbjct 345 CATTTTGAGTAACTACAGTGCGTAACGCACTGAAA--GTATTAAGAATATTTTTCCTTTC 402 Query 51593 CAA 51595 || Sbjct 403 TAA 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543479862212040