Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq103479 100 2e-16 >seq103479 Length=224 Score = 100 bits (110), Expect = 2e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||||| ||||| | |||| ||||||||||| || ||||| |||||||| Sbjct 36 CCACCACGCAGCCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCA 95 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||||||| ||||| || | || || | ||| |||||| ||| Sbjct 96 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCCGGGGGG 155 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | || |||||||| |||||| Sbjct 156 ATCCCCTCCTTGTCCTGGATCTT 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421718021920844