Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq103479 125 7e-24 >seq103479 Length=224 Score = 125 bits (138), Expect = 7e-24 Identities = 136/178 (76%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 40728 CACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACA 40786 |||| | || || || ||| ||||| | | | |||| | |||| || || | |||| Sbjct 224 CACCCTGGAGGTGGAGTCCAACGACACCATCGACAACG-TGAAGGCCAAGATCCAGGACA 166 Query 40787 AAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG 40846 | ||||| |||||| ||||||| || || ||||||| ||| ||||| |||||||| || | Sbjct 165 AGGAGGGGATCCCCCCGGACCAACAGCGCCTCATCTTCGCTGGCAAGCAGCTGGAGGATG 106 Query 40847 AGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| ||||||||||||||||||||| |||| ||||| || ||| |||| Sbjct 105 GCCGCACCCTTGCGGACTACAACATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCG 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514541950801840