Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq103479 89.7 4e-13 >seq103479 Length=224 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || |||| ||| || | ||||| ||||||||||| || ||||||||||| || Sbjct 35 CCCACCACGCAGCCGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGC 94 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||||| || ||||| || | || || |||||||||||| || Sbjct 95 AAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCCGGGGG 154 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| ||||| || || || |||||| | | | | |||||| || |||| Sbjct 155 GATCCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCGTTGGACTCC 212 Query 16886 GTTTCCACGGTG 16897 |||| |||| Sbjct 213 ACCTCCAGGGTG 224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404568828965410