Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq103479 93.3 5e-14 >seq103479 Length=224 Score = 93.3 bits (102), Expect = 5e-14 Identities = 126/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| || |||| || |||||| ||||| |||||||| | || ||||| | Sbjct 48 CGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCA 107 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||| ||||| || | |||||| ||||| | || | | ||||||| Sbjct 108 TCCTCCAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCCGGGGGGATCCCCTCCTTG 167 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCA 46550 ||| |||||| ||| | ||| | | | |||||| | || ||||| |||| Sbjct 168 TCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCGTTGGACTCCACCTCCA 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564495401188680