Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 5e-14 >seq1 Length=17771 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/139 (76%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 22401 TGCCCTTATAGCTCAGTGGTAGAGCAACGCTTTTGTAAAGCGTAGGTCGTTGGTTCAAAT 22460 |||| || |||||||||||||||||| | ||||||| ||| |||||| ||||| ||| Sbjct 17169 TGCCTTTTTAGCTCAGTGGTAGAGCATTGTATTTGTAATGCGGTGGTCGTCGGTTCGAAT 17110 Query 22461 CCGACTGGGGGCTT---TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAG 22517 ||||| ||||| || || |||||||| ||||||||||| ||| |||| Sbjct 17109 CCGACAAAAGGCTTGTGTGCAGATGTAGCTCAG-TGGTAGAGCGCAACCTTGCCAAGGTT 17051 Query 22518 GATGTCAGGAGTTCGAGTC 22536 |||| || | ||||||||| Sbjct 17050 GATGCCATGGGTTCGAGTC 17032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559871087791600