Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq103479 123 3e-23 >seq103479 Length=224 Score = 123 bits (136), Expect = 3e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 27445 ACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAG 27504 || || ||||| ||||| || | ||| | || ||||||| || || ||||||||| Sbjct 223 ACCCTGGAGGTGGAGTCCAACGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAG 164 Query 27505 GAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGAT 27564 ||||| || || || ||||| ||||| || || || ||||| ||||| || ||||||| Sbjct 163 GAGGGGATCCCCCCGGACCAACAGCGCCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGC 104 Query 27565 CGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTT 27624 || ||||| || ||||| || |||| ||||| ||||| || || || || |||| || Sbjct 103 CGCACCCTTGCGGACTACAACATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGGCTG 44 Query 27625 CGCGGTGG 27632 || ||||| Sbjct 43 CGTGGTGG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569560734108080