Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq6512 93.3 3e-14 >seq6512 Length=2066 Score = 93.3 bits (102), Expect = 3e-14 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475 || ||||| | |||||||| ||||| ||||||||||||||||||||||| | ||||| Sbjct 979 ACCGTCATACGGGAGGGAATAGCGTGAGGGTTGATGATGAGGTCGGGCACAATACCGTCG 1038 Query 71476 TTGTCGAAGGGCATGTCCTCCTGG 71499 || ||||||||||||||||||| Sbjct 1039 CGGTTGAAGGGCATGTCCTCCTGG 1062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338722423064256