Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq215 113 6e-20 >seq215 Length=4156 Score = 113 bits (124), Expect = 6e-20 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 126208 TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTG 126267 ||||| || |||| || |||||| || |||||||||||| ||| || || | |||||||| Sbjct 2594 TCCTTACCGCCCTGCAGCCGCGTACCGAACTGACCGTCCTGCTGCAGCAGCGGCACATTG 2535 Query 126268 TTGGCTCCCACAAAGTCCTGCGCAAACTTGACAATGGTCTCGCAC-AGGTTCTGCTCGCC 126326 || | || ||||||||||| || | || || |||| |||| ||| ||||||||| Sbjct 2534 TTCGAGCCGACAAAGTCCTGTGCCATGGCCACGATCGTCT-GCACGAGGGACTGCTCGCC 2476 Query 126327 GTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGAT 126380 ||| | |||| | | ||||| | ||||| ||| |||||| | |||||||| Sbjct 2475 GTGGTGGTAGGCCGAGTGCTCCGAGACGTAACCGGAGAGCTGCACGACCTTGAT 2422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611313558406400