Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7095 87.8 2e-12 >seq7095 Length=227 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||| || ||| || || || || || || || Sbjct 30 CGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCCTCCTCGAGCTGCTTGCC 89 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || |||| || ||||| |||||||| |||||||| || ||||| ||||| || Sbjct 90 CGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 149 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | |||||| | | || || |||| || | ||| ||||||||||| || Sbjct 150 CACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGGGCGATCGTCTTGCCGGTCAGCGT 209 Query 114365 TTTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 210 CTTCACGAAGATCTGCAT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420081844337568