Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1748 98.7 1e-15 >seq1748 Length=1330 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| |||||||||||||| || |||||||| | | ||||| |||||||| || Sbjct 498 GTGGAGGGCATCTTCTTCTCTGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGC 439 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 102323 | ||||| ||||| ||| ||||||||| ||||| || |||||||| || ||| Sbjct 438 GTGATGCCCGGTCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGGCTGCACACG 379 Query 102324 GAGTTTGCG 102332 || |||||| Sbjct 378 GACTTTGCG 370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620662758750080