Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7095 87.8 1e-12 >seq7095 Length=227 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || || ||||| || || ||||| Sbjct 37 TCCTTCTGGATGTTGTAGTCGGCCAGAGTGCGGCCCTCCTCGAGCTGCTTGCCCGCAAAG 96 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || ||| Sbjct 97 ATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 156 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||||| || || | || || || || || || || |||||||| Sbjct 157 TCGATCGTGTCGCTCGCCTCCACCTCCAGGGCGATCGTCTTGCCGGTCAGCGTCTTCACG 216 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 217 AAGATCTGCAT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324592990771392