Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq6914 86.0 3e-12 >seq6914 Length=41223 Score = 86.0 bits (94), Expect = 3e-12 Identities = 86/111 (77%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 61718 CGCTG--ATGCCGGATGCCCACTCGGGCAAGGGATCTGCGGTCGGCACCGTCATCCCCAC 61775 ||||| |||||||| | |||||| |||| || || | ||||||||||||||||| || Sbjct 24592 CGCTGTCATGCCGGACGTCCACTCCGGCATCGGCTCCACCGTCGGCACCGTCATCCCAAC 24533 Query 61776 CAAGGGCGCTGTCATTCCGGCCGCTGTTGGGGTGGACATCGGCTGCGGCAT 61826 || ||||| | || ||| | ||||| |||||||| ||||||||||| Sbjct 24532 CACCGGCGCGCTGATCCCGTCGAGCGTTGGCGTGGACATTGGCTGCGGCAT 24482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258898809648864