Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6703 86.0 2e-11 >seq6703 Length=6023 Score = 86.0 bits (94), Expect = 2e-11 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || || || ||||||| | || || |||| || | |||||| Sbjct 4381 ATGGAGGCGAGGTTGCACACGGCCGTCTCCTCCGGCGACG-TGTACTCGATAATCTCCGT 4439 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||||||||| || | ||||||||| || | ||||||||||| || || | ||| || || Sbjct 4440 GCACAGGTTGGAGCACTTGATGGTACCAATGTTCTTCTGGTTCGACTTGCGGTTGCAGGC 4499 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 |||||||| || ||| | || || ||||| ||||| Sbjct 4500 GTCCTTGTAGAGCATGAACGGCACGCCCGTCTCGATCTG 4538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471624044946968