Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_022987.1 Length=43940 Score E Sequences producing significant alignments: (Bits) Value seq4896 84.2 6e-12 >seq4896 Length=12029 Score = 84.2 bits (92), Expect = 6e-12 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 10370 GCGAAGGTCTTCTCCTTCCAGCGTGCGTACGGCGCAGGCGTTGCGAAGATCGCAGCGACC 10429 || |||||||||||||||||||| ||| ||||| || || |||| |||||| |||| Sbjct 4875 GCCAAGGTCTTCTCCTTCCAGCGCCAGTATGGCGCGGGTGTGGCGACGATCGCGACGACG 4816 Query 10430 ACGGGCATGACCGAGGAGGAAGTGGAGAAGCTGGTGCGCGCCGAGGCCGAGCGTTACCCG 10489 ||||| |||||||| | || |||||| |||| | || |||| ||| ||| | Sbjct 4815 ACGGGGCTGACCGAGCACGAGGTGGAGCGGCTGATCGTGGCGGAGGAGCAGCACTACAAG 4756 Query 10490 GAGCTGGGC 10498 || |||||| Sbjct 4755 GACCTGGGC 4747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140469276815136