Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq6914 114 4e-21 >seq6914 Length=41223 Score = 114 bits (126), Expect = 4e-21 Identities = 203/296 (69%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 37217 TCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAAT 37276 |||||||||| |||||||| |||||| | ||| || ||||| || || || Sbjct 23720 TCATCCCTGGGTCGATGGGGGCGAAGAGCTACATTGTCCGCGGGAAAGGCTCGATGGAGA 23661 Query 37277 CGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCC 37336 | |||||| ||| ||||| || || || | ||||| | ||| || || |||| Sbjct 23660 GCTACTGCTCGTGCTCGCACGGCGCGGGGCGGCGGTACAGCCGCGGCGAGGCGAAGCGCC 23601 Query 37337 GGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCG 37396 | ||||| |||| || || ||||| |||||| || |||| ||| | ||||| | | Sbjct 23600 GCTTCACCCTCGACGACCACGAGGCCGCCACCGCCGGCATCGCCTGCAGGAAAGACACGG 23541 Query 37397 AAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAAT 37456 | || | ||||| ||||| ||||| ||||||||||| || || || |||| || || Sbjct 23540 ATGTCCTTGACGAAACGCCTGCGGCGTACAAGGACATTGACGCCGTGATGGAGGCCCAGC 23481 Query 37457 CCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGGTTGA 37512 | ||||| || | || |||||| | || ||| | ||||| ||||| ||| Sbjct 23480 GGGATCTGGTCGAGGTTGTCTGCACGCTCAGGCAGGTCATCTGCGTCAAGGGGTGA 23425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139266223467168