Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq6914 86.0 3e-12 >seq6914 Length=41223 Score = 86.0 bits (94), Expect = 3e-12 Identities = 87/113 (77%), Gaps = 9/113 (8%) Strand=Plus/Minus Query 56168 CAGCTCGGCACCCTCGGCGGCGGTAACCATTTCATCGAGCTGTGCCTCGATCA------C 56221 || ||||||||||||||| || ||||| ||||||||||| |||||||| | | Sbjct 24237 CACCTCGGCACCCTCGGCTCAGGCAACCACTTCATCGAGCTCTGCCTCGACGACGACGCC 24178 Query 56222 CTTGAC---CGGGTGTGGCTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGCAA 56271 ||||| ||||||||| || | ||||||||||| ||||| || || ||||| Sbjct 24177 GTTGACCCGCGGGTGTGGGTGATGCTGCACTCCGGCTCGCGCGGTGTGGGCAA 24125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199741410721608