Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_023747.1 Length=59672 Score E Sequences producing significant alignments: (Bits) Value seq6914 86.0 2e-12 >seq6914 Length=41223 Score = 86.0 bits (94), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 54030 CGCTG--ATGCCCGATGCGCATTTCGGTAAGGGCAGCAGTGTCGGCACGGTGATCCCAAC 54087 ||||| ||||| || | || | ||| | ||| || |||||||| || |||||||| Sbjct 24592 CGCTGTCATGCCGGACGTCCACTCCGGCATCGGCTCCACCGTCGGCACCGTCATCCCAAC 24533 Query 54088 CGAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCGATATTGGTTGCGGCATGATCGCGGC 54147 | ||||| |||||||| || ||| ||||| || ||||| |||||||| ||||||| Sbjct 24532 CACCGGCGCGCTGATCCCGTCGAGCGTTGGCGTGGACATTGGCTGCGGCATCCTCGCGGC 24473 Query 54148 CCGCAC 54153 |||||| Sbjct 24472 CCGCAC 24467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190805540831712