Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3136 255 7e-63 >seq3136 Length=15574 Score = 255 bits (282), Expect = 7e-63 Identities = 414/590 (70%), Gaps = 12/590 (2%) Strand=Plus/Plus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 ||||| || | ||||||| |||||||||| ||||| || || |||||||| | || ||| Sbjct 806 AGGGGGTCAATGTGGTTGCGGTAGACGTGGGCGTCGCCGAGCGTGTGCACCAGCTCGCCC 865 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039 ||||| || || ||| | | ||| | || | |||||| || |||| || |||||| Sbjct 866 GGCTTCAGCCCCGTCGCCTTGGCGATCAGGATGGTGAGAAGGCTGTAGGACGCGATGTTG 925 Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCC-- 147097 |||||||| || ||||||||||| | || | |||||||| ||||| |||||||| | Sbjct 926 AAGGGGACGCCGAGGCCCATGTCGCAGGAGCGCTGGTACATTTGGCAGGAGAGCTCGCGG 985 Query 147098 -CGTCGG---CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGC 147153 || || ||||| ||||| || || ||||||||| || || |||||| | Sbjct 986 GTGTGGGGGTTGACGTAGAACTGCGCCATGAGGTGGCACGGGGGGAGGGCCATGCGGCTG 1045 Query 147154 AGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATC 147213 || | || |||||||| |||| || | || || | | | ||||| || | | Sbjct 1046 AGCGCGGCCGGGTTCCATGCCGTGAAGAGGAGGCGGCGGTCGTTCGGGTTGGTCCGGAGC 1105 Query 147214 TCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCC 147273 |||| | | | | |||||||||||||||||| ||||||| | || | | Sbjct 1106 GTCTCGACGATTGTCTTGATCTGGTCCACGCCCTGGCCGTCGTAGTTAGCGTCGTGCTTC 1165 Query 147274 ACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTC--GCCGG 147331 ||| ||| |||||||| | ||||||||||||||| || || |||||||| | Sbjct 1166 GTGTAGTCGGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCCATCTCC 1225 Query 147332 GCTTTCTGTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAG 147390 | | || | ||| ||| || | | | ||| |||||| |||| |||| | |||||||| Sbjct 1226 TCATACTCGGTGAG--GCCGCGGCTG-TCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAG 1282 Query 147391 ATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGC 147450 ||| ||| |||||| |||||||| ||| | || ||| ||| || | ||||||| Sbjct 1283 ATGTGCACGCCCTTGTCGGAGAGCAGCTTCGCGTTCGTCTCGCCGCGCAGAAACCAGATG 1342 Query 147451 AGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 |||||||| | |||||| |||| ||||| | ||| || ||||| || || Sbjct 1343 AGCTCCTCGCAGACCCCCTTCCAGAAGACGCGCTTCGTCGTCAGGAGAGG 1392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583413138489600