Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_028832.1 Length=61511 Score E Sequences producing significant alignments: (Bits) Value seq6914 95.1 5e-15 >seq6914 Length=41223 Score = 95.1 bits (104), Expect = 5e-15 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 54611 CACGTCGCACTCATGCCCGACGCACATTTCGGCAAAGGCAGCTCGGTCGGCACAGTCATC 54670 ||| |||| ||||||| |||| || | ||||| ||| | | |||||||| |||||| Sbjct 24597 CACATCGCTGTCATGCCGGACGTCCACTCCGGCATCGGCTCCACCGTCGGCACCGTCATC 24538 Query 54671 CCCACCCAAGGCGCCGTCATCCCGGCCGCCGTCGGCGTCGACATCGGCTGCGGCATGATC 54730 || ||| ||||| | |||||| | ||| ||||| ||||| ||||||||||| || Sbjct 24537 CCAACCACCGGCGCGCTGATCCCGTCGAGCGTTGGCGTGGACATTGGCTGCGGCATCCTC 24478 Query 54731 GCAGCCCGCACCAC-CTACACCGCGCAAGACCTC 54763 || |||||||| | || | || |||| |||||| Sbjct 24477 GCGGCCCGCACGTCGCTGCGCC-CGCAGGACCTC 24445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196689623562864