Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq157 140 7e-28 seq396 84.2 5e-11 >seq157 Length=1104 Score = 140 bits (154), Expect = 7e-28 Identities = 297/441 (67%), Gaps = 7/441 (2%) Strand=Plus/Minus Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 230262 || ||||| ||| | ||||||||| |||||||| | || |||||| ||| ||| Sbjct 540 GTGGAAGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGT 481 Query 230263 GTGATGCCTGGCCT--CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATC 230320 ||||||| || || || || | |||||| ||||| |||||||||||||| || Sbjct 480 CTGATGCCGGGGCTGACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGTCTACACA 423 Query 230321 AACAGTTCGGCGAGCTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAGACGG 230377 | |||| || |||| || | || || |||| || || |||| | Sbjct 422 CGGACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGCGAGCGCG 363 Query 230378 TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTC 230437 | | |||||| || || || | | ||| |||||||| |||||||| | | Sbjct 362 TGCTGGAGATCATTGTGGATGCGGTGAACATCGAGCGAGAGTTCATCTGTGACGCGCTGC 303 Query 230438 CATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCG 230497 | || || |||||||||||||| || || |||| ||||||||||| ||||| || | Sbjct 302 CGGTGCGGCTGATTGGCATGAACGCAGAGCTCATGGCGCAGTACATCGAGTTCGTCGCGG 243 Query 230498 ACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCAT 230557 |||| | |||| | || || | ||||| |||||||| | | | || || | | Sbjct 242 ACCGGCTGCTTGTATCGCTCGGCGAGGAGAAGCACTACAACTCGACGCAGCCGTTCGACT 183 Query 230558 TTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACT 230617 | |||||| | || ||||| || || ||||| |||||||| || ||| || |||| | Sbjct 182 TCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTTGAGAAGAAGGTGGGTGAGT 123 Query 230618 ATCAGAGGCCTGGTGTGATGA 230638 | |||| | | || ||||||| Sbjct 122 ACCAGAAGGCCGGCGTGATGA 102 >seq396 Length=15861 Score = 84.2 bits (92), Expect = 5e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 165715 TCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCAC 165774 ||||||||||| |||||||||| | ||||||| || ||||||||||||||||||||||| Sbjct 15179 TCTAGCTCAGTTGGTAGAGCGCGTGGCTTTTAACCTCGTGGTCGTGGGTTCGAGCCCCAC 15120 Query 165775 G 165775 | Sbjct 15119 G 15119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057788395297010