Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2242 205 1e-47 >seq2242 Length=10277 Score = 205 bits (226), Expect = 1e-47 Identities = 468/695 (67%), Gaps = 22/695 (3%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| |||| || | |||| || |||||||||| ||||| || ||| ||| Sbjct 3540 AGCTGCGCCTTGAGGGCATCGATGTGGCTGCGGTAGACGTGGGCGTCGCCGAGGGTGTGC 3481 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | || || ||| || ||||| | ||| | | ||| ||||| | |||| Sbjct 3480 ACAAGCTCACCAGGCCGCAGACCCGTCGCCTTGGCAATGAGAATGGTGAGCAGCGCGTAG 3421 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||| ||||||||||| || || || |||||||| | ||| || ||||||||| |||| Sbjct 3420 GAGGCGATGTTGAAGGGGACGCCGAGGCCCATGTCGCACGAACGTTGGTACAGCATGCAG 3361 Query 145852 GAGAGCTCCC----CGCC--CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGG 145905 || ||||| | | || ||||||||| || || | |||||| |||||||| Sbjct 3360 GATAGCTCGCTCTTCTCCGTGTTCACGTAGAATTGAGCGAGCAAGTGGCACGGCGGCAGT 3301 Query 145906 GCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGG 145965 ||||| | |||| | ||||||||| || |||| | ||| | | | | ||| Sbjct 3300 GCCATCTTGTGCAGCGCGCACGGGTTCCACGCAGTGAACAGGAGACGGCGGTCGTTCGGG 3241 Query 145966 TTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCT 146025 ||| ||||||| | | | | | | ||| ||||||||| |||| || ||| | | Sbjct 3240 TTCGCCTTGATCGTCTCCACGATGAACTTGATCTGGTCCACCCCCTCGCCGTCGTAGT-T 3182 Query 146026 GTCTTGGAGTCCAC-GTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCC 146084 ||| ||| || | ||| | ||||||||||| | ||||||||| |||||||| || || Sbjct 3181 CGCTTCGAGCCCCCGGTATTCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCC 3122 Query 146085 CAGGTCC----CCGGGCTCCCTGTGCCCCAGCC-CGGCCCGGGCGAGGAAGTCCCGGGAC 146139 |||||| ||| || |||| | |||| ||| | | |||| || || || || Sbjct 3121 GAGGTCCATCTCCGTATTCTCTGT---CAAGCCGCGG--CTGTCGAGAAACTCGCGCGAG 3067 Query 146140 CCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCC 146199 |||||| |||||||||| | | | || | | | |||| | | || || ||| Sbjct 3066 CCGTTGCCGTCCCAGATGTGTATGTCCTTGTCCGCGAGCAGCTGCGCGTTTGTCTCCCCG 3007 Query 146200 CTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGC 146259 | | |||||| |||| ||| ||| || || | ||||||||| | ||| || |||||| Sbjct 3006 CGCAGGAACCACAGCAACTCCTCGCACACGCCTCGCCAGAAGACGCGCTTCGTCGTCAGC 2947 Query 146260 AGGG---GGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGTG 146316 || | || | | | || |||||| || ||| | ||||||| | || |||| Sbjct 2946 AGTGGCAGGCGGTTGTCGCGTAGGGAGAACCGCATCTGTGCGCCGAAGAGGCTCAAGGTG 2887 Query 146317 CCCACGCCCGTCCTGTCCCCCCT-GCGCACCCCGT 146350 |||||||| || | |||| || | ||| |||||| Sbjct 2886 CCCACGCCGGTGCGGTCCTCCTTCGCGATCCCCGT 2852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590057423353080