Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq157 91.5 3e-13 >seq157 Length=1104 Score = 91.5 bits (100), Expect = 3e-13 Identities = 275/417 (66%), Gaps = 11/417 (3%) Strand=Plus/Plus Query 157244 ACCCCGGGCTTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGA 157303 || |||| ||| |||||| |||| | |||||||| ||||| ||||| ||||| || Sbjct 107 ACGCCGGCCTTCTGGTACTCACCCACCTTCTTCTCAAAGAAGTTCGTCTTGCCCTGCAGC 166 Query 157304 GAAATCATGTCCATCCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGC 157363 || ||||| ||||| | ||||| || | | ||||||| ||| || | || ||| Sbjct 167 GAGATCATCTCCATGAAGTCGAACGGCTGCGTCGAGTTGTAGTGCTTCTCCTCGCCGAGC 226 Query 157364 TGGTTCAGCCAGTAG-TCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGAT 157422 | | || ||| | ||||| || |||| |||||||| | |||| || || | || Sbjct 227 -GATACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGCCATGAGCTCTGCGTTCAT 285 Query 157423 ACCGATGAGCGCGACGGGAAGCGCCGACGAAATGAATTCGCACTCAACGCTAACAGCGTG 157482 || || ||| || || ||||| | ||||| || | ||| | | | || || | Sbjct 286 GCCAATCAGCCGCACCGGCAGCGCGTCACAGATGAACTCTCGCTCGATGTTCACCGCATC 345 Query 157483 CTTGAAAATTTCATGAACTCTCTCCCGCGGCAGCCTATTCTTGAGATGC---TTGTAGAT 157539 | | || || | || | ||| |||||||| | | ||||| ||| ||||| | Sbjct 346 CACAATGATCTCCAGCACGCGCTCGCGCGGCAGTTTGTGCTTGATGTGCGAGTTGTACAG 405 Query 157540 GAGA-ACG-GAAG-CCGTGGCGTGAAGTCCTTCGTCTCTGGCGATGAGAGAGTTCGCGAA 157596 || | | |||| ||||| || || || ||||| | | |||||| ||| ||| Sbjct 406 CAGGCATGCGAAGTCCGTG---TGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAA 462 Query 157597 CGACAAACCCTTGAACTTCTGCCGCTTCTTCAGCCAGTAGATGGCGCAGAACGACCC 157653 || || ||| | | ||||||||||||||| | | |||||||||||||| Sbjct 463 CGTCAGCCCCGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCC 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073730258700736