Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1556 91.5 1e-13 >seq1556 Length=11391 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 33544 AAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTT-TGCATCGTTCAC 33602 ||| ||||| | |||| || || ||| | || ||||||||||| |||| | ||| Sbjct 6613 AAGGTCAAGATTCGCACCATCAAGATCCCAAACATCGGCGACAAGTTCTGCAGCCGCCAC 6672 Query 33603 GGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGA 33662 || | | |||||||| |||||| || |||| ||||||||| |||| ||| Sbjct 6673 GGACAA-AAGGGCACCAACGGCATCCAGTTTCGCCAGGAGGACATGCCCTTCAACCGCGA 6731 Query 33663 CGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 |||| | || |||||||| |||||||||| || || | ||||| ||||||||||| Sbjct 6732 CGGCATCGTGCCGGACCTCATCATCAACCCCCACGCCATTCCCTCCCGCATGACGGT 6788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356222194624681