Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq965 84.2 3e-11 >seq965 Length=4513 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/138 (74%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 77350 CCGCCGGGCACCAGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAG 77409 ||||||||| | | || || ||||| ||||||||||| || ||||||||||| || || Sbjct 1555 CCGCCGGGCGC-ACCAATGTTGAGTAACACAGGTTGTGTGCGATGATGATGGACGGATAC 1613 Query 77410 AGGCTGGCGAAGTCGAAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAG 77469 || |||||||||| || |||||| ||||||| |||| | || |||| | Sbjct 1614 AGCGACGCGAAGTCGAGCGTTGCGACGGGGCAGTTGTAGAAGCCTTTGATCGGGTCGATG 1673 Query 77470 ACGGTGGCACCCTGGTAG 77487 |||||||| || | |||| Sbjct 1674 ACGGTGGCGCCTTCGTAG 1691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771325070781240