Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq157 82.4 1e-10 >seq157 Length=1104 Score = 82.4 bits (90), Expect = 1e-10 Identities = 118/164 (72%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || |||||||| || ||||||||||||||| | || | |||||| | Sbjct 402 ACAGCAGGCATGCGAAGTCCGTGTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGA 461 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 |||| || || ||||| || || ||||| || ||||| || | | |||| || || || Sbjct 462 ACGTCAGCCCCGGCATCAGACCGCGCTTCTTCAGCCAGAACA-GCGCGCAGAACGACCCG 520 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 32815 ||||||||||| ||||| || || || ||| | || || | ||| Sbjct 521 GAAAAGAAAATGCCTTCCACCGCAGCGAAGCCTATCAGCCGCTC 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633611193109200