Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq157 111 3e-19 >seq157 Length=1104 Score = 111 bits (122), Expect = 3e-19 Identities = 293/442 (66%), Gaps = 9/442 (2%) Strand=Plus/Minus Query 243319 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 243378 || ||||| ||| | ||||||||| |||||||| | || |||||| ||| ||| Sbjct 540 GTGGAAGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGT 481 Query 243379 GTGATGCCTGGCCT--CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACC 243436 ||||||| || || || || | |||||| ||||| ||||||||||| || ||| Sbjct 480 CTGATGCCGGGGCTGACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGTCTACACA 423 Query 243437 AACAGTTCGGTGAGCTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAAACGG 243493 | |||| || |||| || | || || |||| || || ||| | Sbjct 422 CGGACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGCGAGCGCG 363 Query 243494 TCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTC 243553 | | ||||| || || || | | ||| || ||||| || ||||| | | Sbjct 362 TGCTGGAGATCATTGTGGATGCGGTGAACATCGAGCGAGAGTTCATCTGTGACGCGCTGC 303 Query 243554 CATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCG 243613 | ||||| |||||||||||| | || ||||||| ||||||||||| ||||| || | Sbjct 302 CGGTGCGGCTGATTGGCATGAACGCAGAGCTCATGGCGCAGTACATCGAGTTCGTCGCGG 243 Query 243614 ACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCT 243673 |||| | | | |||| || | ||||| |||||||| | | | || || | || Sbjct 242 ACCGGCTGCTTGTATCGCTCGGCGAGGAGAAGCACTACAACTCGACGCAGCCGTTCGACT 183 Query 243674 TTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATT 243733 | |||||| | || ||||| || || || || |||||||| || ||| || |||| | Sbjct 182 TCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTTGAGAAGAAGGTGGGTGAGT 123 Query 243734 ATCA-ACGCCCTGGTGTGATGA 243754 | || | | || || ||||||| Sbjct 122 ACCAGAAGGCC-GGCGTGATGA 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102842878782450