Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq157 105 8e-18 >seq157 Length=1104 Score = 105 bits (116), Expect = 8e-18 Identities = 157/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||||||||| || |||||||| || || ||| ||| || ||||| ||||| Sbjct 424 GTGTAGACCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCCGGCATCAGACC 483 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| | ||| || || || || || ||||| || || ||||| Sbjct 484 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAAAAGAAAATGCCTTCCACCGC 543 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 ||||| | | || ||||| || ||| || | | | | |||| || || Sbjct 544 AGCGAAGCCTATCAGCCGCTCCTGAA---AGCTCGCGCTGCTCCCGATCCACCGCACGGC 600 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||||| |||||| ||| ||| ||||||| ||||| ||||| Sbjct 601 CCACTCCGCCTTCCTCTGGATGCACGGGATCGTCTGTATCGC 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597333984401160