Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1110 226 4e-54 seq956 87.8 2e-12 >seq1110 Length=73125 Score = 226 bits (250), Expect = 4e-54 Identities = 475/699 (68%), Gaps = 17/699 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || || || || | ||| || || ||||||||||| || || || || | || Sbjct 65273 TCAAAGTCCTCGCCGCCAAGGTGCGTGTCACCCGCGGTCGCCTTCACCTCGAACACGCCG 65214 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | || || ||||| ||||| || || || ||||| || ||||| ||| Sbjct 65213 GACTCGATCGTCAGCAGCGTCACATCGAACGTGCCGCCGCCAAGGTCGAAGATGAGCACG 65154 Query 7577 TTCGTATCGTCGT-CTTTGTTCTTA--TCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | || | | || || | | || | |||||||||||||| || || || || Sbjct 65153 TTCTTCTCTCCCTTCTCTGCTTTGCGGTCCATGCCGTACGCGATAGCAGCGGCGGTCGGC 65094 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || || || || ||| |||||||| || | | || ||||||||||| || Sbjct 65093 TCGTTGATGATGCGCAGGACGTTGAGGCCAGCGATGGAGCCGGCGTCTTTCGTCGCCTGG 65034 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || ||||| ||||| ||||| |||||||| || ||||| |||||| |||| || | ||| Sbjct 65033 CGCTGCGAGTCGTTGAAGTACGCCGGGACGGTGACGACGGCGTCCTTGACGGTCGTGCCG 64974 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || || | ||||| | || ||||| || || ||||| | || ||||| || | Sbjct 64973 AGGTAGGCCTCCGCCGTCTCCTTCATCTTCTGCAGCACCATAGCCGAGATCTCCTCTG-G 64915 Query 7814 GCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC 7872 | | | || || | | ||| | | || || | || | || || || | Sbjct 64914 GAAGAAGGTCTTGGACTGACCCTGGTACTCGACGTTGATGACCGGCTT---GCCATCCTT 64858 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATAT-CGTCT--TGGACCTGTTGGTCCGAAAA 7929 | | | ||||| | | ||| | ||||| | || || || | | | ||| || Sbjct 64857 GACGGTCACCTTGAAGGGCCAGTGCTTCATGTCCGACTGAAGGTCAGGATCGTC---GAA 64801 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 ||| | ||||| | ||||| || ||||| || ||||| | ||||||||||| || Sbjct 64800 CTTGCGGCCGATCATGCGCTTCGCGTCAAACACGGTGTTGCTCGGGTTCATGGCCACCTG 64741 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 ||||||||| || || ||||| || || || || || || || |||||||| || Sbjct 64740 GTTCTTCGCGGCATCGCCGATCAGGCGCTC---TGCCTCGGTGAAGGCAACGTACGACGG 64684 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 ||||| || || || ||||||||||| || ||||| || ||||||| | ||||||| Sbjct 64683 TGTCGTGCGGTTACCCTGGTCGTTCGCGATGATTTCCACCTGGTCGTTCTTGAAGACGCC 64624 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||||||| ||||| || || | ||||| ||||| || Sbjct 64623 GACGCACGAGTACGTCGTGCCCAGGTCAATGCCGATGGC 64585 >seq956 Length=75547 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 ||||||||||| || || || || || || || | |||||||||||| |||||||| Sbjct 7936 GCCGCCGCCGTCGGCTCGTTGATGATGCGCAGCACCTCCAGGCCAGCAATCGTTGCCGCC 7995 Query 7679 TCTTTCGT-CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 | || || |||| | || ||||| ||||| ||||| ||||| ||||| || || || | Sbjct 7996 GCCTTGGTGCGCTCG-CGCTGCGAGTCGTTGAAGTACGCCGGCACCGTCACCACGGCCTT 8054 Query 7738 CGTGACTTTCTTACCGAGATAC 7759 | | || | ||| ||||| ||| Sbjct 8055 CTTCACCTGCTTGCCGAGGTAC 8076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635111943826680