Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1681 95.1 4e-14 >seq1681 Length=36401 Score = 95.1 bits (104), Expect = 4e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || ||||| ||||||| | || || |||| || ||||| || Sbjct 1441 ATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACG-TGTACTCGACAATTTCCGT 1499 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||| ||||| || | |||||| ||||| | |||||||||||| || || ||||| || || Sbjct 1500 GCATAGGTTCGAGCACTTGATCGTGCCGAGATTCTTCTGGTTCGACTTGCTGTTGCATGC 1559 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 |||||||| || ||| | || || ||||| ||||| Sbjct 1560 GTCCTTGTAGAGGATGAACGGCCCCCCCGTCTCGATCTG 1598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471768060919299