Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq1704 109 2e-19 >seq1704 Length=2369 Score = 109 bits (120), Expect = 2e-19 Identities = 235/348 (68%), Gaps = 10/348 (3%) Strand=Plus/Minus Query 37172 TTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGGCTCGA 37231 |||| ||||| |||||| | || || ||| || || | | | || || || || | Sbjct 529 TTACTCGCAAGGGTGCTACTTCTGCACGTATGGGTGAGCTCGCCGTGATTCCGGGGTCCA 470 Query 37232 TGGGTGC--GAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGCTCTTG 37289 |||| || | || | |||||| || |||||||||| ||| | | |||||| || Sbjct 469 TGGGGGCCTGCAGCTA--CATCGTGCGAGGCAAGGGAAGCGCCGCAAGCTACTGCTCCTG 412 Query 37290 CAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGA 37349 | |||||||| || || ||||| | ||| || || || ||||| || | Sbjct 411 CTCGCACGGTGCTGGGCGCCGCTACAGCCGCGGCGAGGCGCGCCGGCGATTCACTGTGGC 352 Query 37350 GGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGA 37409 ||| |||||||| || || || |||||||||||||| || | ||| | ||||| Sbjct 351 GGACCATGAGGCTGCTACACTGGGCATCGAGTGCCGCAAGGACAGCAGCGTGTTGGACGA 292 Query 37410 GACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGA 37469 ||| || || ||||||||| ||||||||| ||||||| || || || ||| || || Sbjct 291 GACACCTGCTGCTTACAAGAGCATCGATGCTGTCATGGTTGCTCAGGACGACCTTGTAGA 232 Query 37470 CATCGTGCACACG---CTGCGCCAAGTCGTTTGCGTGAAGGGTTGAGG 37514 ||| |||| |||| ||||| | || ||||| || ||||| Sbjct 231 ---GGTGGTCACGGTATTGCGGCAAGTGCTATGTGTGAAAGGGTGAGG 187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139278854973524