Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1037 91.5 1e-13 >seq1037 Length=20842 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| || || || ||||| | || || Sbjct 17087 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCCTCCTC 17146 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || |||||||| |||| |||||||| || |||| | || || ||||| Sbjct 17147 CAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 17206 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| | | || | |||||||| | ||||| || | || |||||| | Sbjct 17207 GATCTTGGCCTTCA-CGTTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTCT 17265 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 | || || | ||| || || ||||||||||| || Sbjct 17266 TGCCGGTCAGCGTCTTCACGAAGATCTGCATGGT 17299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328693476027840