Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq2242 91.5 1e-13 >seq2242 Length=10277 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 5/198 (3%) Strand=Plus/Plus Query 142552 CGTCGTCACATCGTCACCGCGTGGAACCC-TGCTGAAGTCGACGACATGGCACTTCCTCC 142610 || |||| | | |||| ||||||||||| ||| | | || | |||||||| || || Sbjct 3251 CGCCGTCTCCTGTTCACTGCGTGGAACCCGTGC-GCGCTGCACAAGATGGCACTGCCGCC 3309 Query 142611 GTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCG---TCTGTCATGCCAGCT 142667 ||| ||| || | |||||| |||| || || ||||| | || || ||| ||| Sbjct 3310 GTGCCACTTGCTCGCTCAATTCTACGTGAACACGGAGAAGAGCGAGCTATCCTGCATGCT 3369 Query 142668 GTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCT 142727 ||| || |||||| ||| | ||||||||| || |||||||| || || |||||||| Sbjct 3370 GTACCAACGTTCGTGCGACATGGGCCTCGGCGTCCCCTTCAACATCGCCTCCTACGCGCT 3429 Query 142728 TCTCACACAGCTCATTGC 142745 ||||| |||||||| Sbjct 3430 GCTCACCATTCTCATTGC 3447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500482764857520