Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2242 221 1e-52 >seq2242 Length=10277 Score = 221 bits (244), Expect = 1e-52 Identities = 416/602 (69%), Gaps = 30/602 (5%) Strand=Plus/Minus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 || |||| || | |||| || |||||||||| ||||| || ||||||||||||| || Sbjct 3531 TTGAGGGCATCGATGTGGCTGCGGTAGACGTGGGCGTCGCCGAGGGTGTGCACAAGCTCA 3472 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || ||| || || ||| | | ||| | | ||||||||||| |||| ||| ||| Sbjct 3471 CCAGGCCGCAGACCCGTCGCCTTGGCAATGAGAATGGTGAGCAGCGCGTAGGAGGCGATG 3412 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC- 147095 ||||||||||| || ||||||||||| | ||| | ||||||||| ||| || ||||| Sbjct 3411 TTGAAGGGGACGCCGAGGCCCATGTCGCACGAACGTTGGTACAGCATGCAGGATAGCTCG 3352 Query 147096 CCCGTC-----GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCG 147150 | | || | |||||| || || || | ||||||||||||||| ||||| | Sbjct 3351 CTCTTCTCCGTGTTCACGTAGAATTGAGCGAGCAAGTGGCACGGCGGCAGTGCCATCTTG 3292 Query 147151 GGCAGGTCCGCG---GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC 147207 |||| |||| |||||||| || | || || || || | | | |||||| | Sbjct 3291 TGCAG---CGCGCACGGGTTCCACGCAGTGAACAGGAGACGGCGGTCGTTCGGGTTCGCC 3235 Query 147208 TTAA---TCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264 || | |||| |||| | || | | ||||||||| |||| ||| ||||||| | Sbjct 3234 TTGATCGTCTCCACGATGA---ACTTGATCTGGTCCACCCCCTCGCCGTCGTAGTTCGCT 3178 Query 147265 CCGCAGTCCAC-GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAG 147323 || || || | ||| ||||| ||||| | ||||||||||||||| || || || || Sbjct 3177 TCG-AGCCCCCGGTATTCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAG 3119 Query 147324 G----TCGCCGGGCTTTCTGTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCG 147378 | || ||| | ||||| ||||| || | | | |||||||||| | || ||| Sbjct 3118 GTCCATCTCCGTATTCTCTGT----CAAGCCGCGGCTG-TCGAGAAACTCGCGCGAGCCG 3064 Query 147379 TGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGG 147438 | | ||||||||||| | ||||| | | |||| || | || || || || Sbjct 3063 TTGCCGTCCCAGATGTGTATGTCCTTGTCCGCGAGCAGCTGCGCGTTTGTCTCCCCGCGC 3004 Query 147439 ATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGG 147498 | |||||| |||| |||||| | || || | ||| ||||| | ||| || |||||||| Sbjct 3003 AGGAACCACAGCAACTCCTCGCACACGCCTCGCCAGAAGACGCGCTTCGTCGTCAGCAGT 2944 Query 147499 GG 147500 || Sbjct 2943 GG 2942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583468839712800