Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1681 98.7 3e-15 >seq1681 Length=36401 Score = 98.7 bits (108), Expect = 3e-15 Identities = 192/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 |||||| | || || ||||||||| || |||||||| || || || ||||| || ||| Sbjct 1967 CCAATGCTACGCGTCTTCAACAACACCGCCCGCTACGTGGACCAGGGCGGCGGTAAGCGC 1908 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || ||| || |||| || ||||| ||||| |||||||| | ||| | ||| Sbjct 1907 AAGGGCGCTTTCGCCGTCTATCTCGAGCCCTGGCATGCCGACATCTTTGGCTTTCTGCTG 1848 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 ||| ||| || || | || || | | |||||||||| ||| | ||| | ||| Sbjct 1847 CTGAAACGCAACACGGGAAAGGATGACCAGCGCGCCCGCGACCTCTTCTACGCGCTGTGG 1788 Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220 | |||||||||||| | || ||| || | || | | |||| || ||| ||| Sbjct 1787 ATCCCAGATCTGTTTATGAGGCGTGTGAAAAGCGAGGGAAAGTGGACGCTGATGGATCCG 1728 Query 255221 AACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGA 255264 ||| | || ||||| ||| | | ||||| |||||||| Sbjct 1727 AACACGTGCCCGGGTCTCAGCGATTGCTATGGTGAGGAGTTTGA 1684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588282539092015