Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_028978.1 Length=60609 Score E Sequences producing significant alignments: (Bits) Value seq1704 82.4 3e-11 >seq1704 Length=2369 Score = 82.4 bits (90), Expect = 3e-11 Identities = 190/279 (68%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 55676 GATGTGTGGCTGACCCGCAAGGGCGCGA--TCGACGCGAACGAGGGTGTGCGGGGCCTGA 55733 ||||||||||| || |||||||| || | || | || | | |||| || | | ||| Sbjct 539 GATGTGTGGCTTACTCGCAAGGGTGCTACTTCTGCACGTATG--GGTGAGCTCGCCGTGA 482 Query 55734 TTCCGGGCTCGATGGGCACCTGTTCGTATGTCGTGACCGGCAAGGGTAATCCCG-AGGCG 55792 ||||||| || ||||| |||| || ||||| |||||||| | ||| | || Sbjct 481 TTCCGGGGTCCATGGGGGCCTGCAGCTACATCGTGCGAGGCAAGGGAAGCGCCGCAAGC- 423 Query 55793 TTGTGCTCAGCGCCGCACGGTGCGGGCCGCCGGTTCTCGCGCACGAAGGCGCGCAAGCTG 55852 | ||||| |||||||||| || ||||| | | ||| |||||||| || Sbjct 422 TACTGCTCCTGCTCGCACGGTGCTGGGCGCCGCTACAGCCGCGGCGAGGCGCGCCGGCGA 363 Query 55853 TTCACGGTCGACGACCTCGAGGCGCGTATGCAGGGCATCGAGTACCGCAAGGGC-GAGGC 55911 ||||| || | |||| ||||| || | ||||||||||| |||||||| | | || Sbjct 362 TTCACTGTGGCGGACCATGAGGCTGCTACACTGGGCATCGAGTGCCGCAAGGACAGCAGC 303 Query 55912 GTGGGTCGACGAGATTCCCGACGCATACAAGCCGATCGA 55950 || | | ||||||| || | || |||||| ||||| Sbjct 302 GT-GTTGGACGAGACACCTGCTGCTTACAAGAGCATCGA 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193821153439354