Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1037 86.0 1e-11 >seq1037 Length=20842 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 17085 AGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCCTCC 17144 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| || | ||||||||||| || ||| || ||||| || Sbjct 17145 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCC 17204 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || |||| | |||| ||| || || || | || || Sbjct 17205 TGGATCTTGGCCTTCACGTTCTCGATCGTGTCGCTCGGCTCCACCTCCAGCGCGATCGTC 17264 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||||||||||| |||||| Sbjct 17265 TTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 17296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153781964194717