Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq33 208 9e-49 >seq33 Length=500272 Score = 208 bits (230), Expect = 9e-49 Identities = 462/684 (68%), Gaps = 27/684 (4%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| ||| |||| || ||||||||| |||||||||| ||||| || ||| ||| Sbjct 370275 AGCTGCGCCTTGAGGGCATCAACGTGGTTGCGGTAGACGTGGGCGTCGCCGAGGGTGTGC 370216 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | || || ||| || ||||| | ||| | | | ||| ||||| | |||| Sbjct 370215 ACAAGCTCACCAGGCCGCAGACCCGTCGCCTTGGCAATGAGGATGGTGAGCAGCGCGTAG 370156 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 ||| ||||||||||| || || || |||||||| | |||||||||||||| | |||| Sbjct 370155 GAGGCGATGTTGAAGGGGACGCCAAGACCCATGTCGCACGAGCGCTGGTACAACATGCAG 370096 Query 145852 GAGAGCTC---CCCGCCCG---CCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAG 145904 || ||||| | | | | |||||||||||| ||| || | |||||| |||||||| Sbjct 370095 GATAGCTCGCTCGTGTCTGTGTTCACGTAGAACTGAGCA-AGCAAGTGGCACGGCGGCAG 370037 Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964 ||||| |||| | |||||||||||| |||| | ||| | | | | || Sbjct 370036 CGCCATCTTTTGCAGCGCGCACGGGTTCCAGGCAGTGACTAGGAGGCGGCGGTCGTTCGG 369977 Query 145965 GTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 |||| ||||| ||||| | || || | ||| ||||||||| || | || ||| Sbjct 369976 GTTCGCCTTGATGGTCTCCACGATGAG---CTTGATCTGGTCCACCCCTTCGCCGTCGTA 369920 Query 146022 ATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGG 146081 | | || | || ||| | ||||||||||| | ||||||||| |||||||| || Sbjct 369919 GTTCGCCTCAAACCCCTTGTAATCTGCCCCGAAGTGGCGCCACTGGAAGCCGTAGACAGG 369860 Query 146082 CCCCAGGTCC----CCGGGCTCCCTGTGCCCCAGCC-CGGCCCGGGCGAGGAAGTCCCGG 146136 || |||||| || || |||| | |||| ||| | | |||| || || || Sbjct 369859 GCCGAGGTCCATCTCCTTATTCTCTGT---CAAGCCGCGG--CTGTCGAGAAACTCGCGC 369805 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | | ||| | Sbjct 369804 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCTGCCAGCACCTGCGCACTCGTCTCC 369745 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | |||||| |||||||| ||| || || | ||||||||| | ||| || ||| Sbjct 369744 CCGCGCAGGAACCACAGCAGCTCCTCGCACACGCCGCGCCAGAAGACACGCTTCGTCGTC 369685 Query 146257 AGCAGGG---GGAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGG 146313 ||||| | || | | | || |||||| | |||| | ||||||| | | | Sbjct 369684 AGCAGCGGCAGGCGGTTGTCGCGTAGGGAGAAGCGCATCTGGGCGCCGAAGAGGCCGATG 369625 Query 146314 GTGCCCACGCCCGTCCTGTCCCCC 146337 ||||||||||| || | |||| || Sbjct 369624 GTGCCCACGCCGGTGCGGTCCTCC 369601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075560838720